RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 TPRG1LQ5T0D9 272 aa16.58■□□□□ 0.25
PHGDH-208ENST00000641023 ANXA8L1Q5VT79 327 aa16.58■□□□□ 0.25
PHGDH-208ENST00000641023 Q6ZSR6 202 aa16.58■□□□□ 0.25
PHGDH-208ENST00000641023 OR2A1Q8NGT9 310 aa16.58■□□□□ 0.25
PHGDH-208ENST00000641023 TOE1Q96GM8 510 aaKnown RBP16.58■□□□□ 0.25
PHGDH-208ENST00000641023 CCDC115Q96NT0 180 aa16.58■□□□□ 0.25
PHGDH-208ENST00000641023 VCXQ9H320 206 aa16.58■□□□□ 0.25
PHGDH-208ENST00000641023 IKZF5Q9H5V7 419 aa16.58■□□□□ 0.25
PHGDH-208ENST00000641023 C6orf106Q9H6K1 298 aaPredicted RBP16.58■□□□□ 0.25
PHGDH-208ENST00000641023 KIR3DX1Q9H7L2 352 aa16.58■□□□□ 0.25
PHGDH-208ENST00000641023 LMAN1LQ9HAT1 526 aa16.58■□□□□ 0.25
PHGDH-208ENST00000641023 SLC6A13Q9NSD5 602 aa16.58■□□□□ 0.25
PHGDH-208ENST00000641023 MCM8Q9UJA3 840 aa16.58■□□□□ 0.25
PHGDH-208ENST00000641023 PCOLCE2Q9UKZ9 415 aa16.58■□□□□ 0.25
PHGDH-208ENST00000641023 EVPLLA8MZ36 301 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 GSTA4O15217 222 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 SCN2BO60939 215 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 RASGRP1O95267 797 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 CAPNS1P04632 268 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 LAMP1P11279 417 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 PIM1P11309 404 aaPredicted RBP16.58■□□□□ 0.24
PHGDH-208ENST00000641023 GGT1P19440 569 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 HRH2P25021 359 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 AK4P27144 223 aaPredicted RBP16.58■□□□□ 0.24
PHGDH-208ENST00000641023 PTPN6P29350 595 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 ACTR1BP42025 376 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 RABIFP47224 123 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 WNT3P56703 355 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 ACTR1AP61163 376 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 REEP5Q00765 189 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 PRKCQQ04759 706 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 KIAA0895LQ68EN5 471 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 VN1R5Q7Z5H4 357 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 R3HCC1LQ7Z5L2 792 aaKnown RBP16.58■□□□□ 0.24
PHGDH-208ENST00000641023 ADCK2Q7Z695 626 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 DTWD1Q8N5C7 304 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 ANKRD53Q8N9V6 530 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 EME1Q96AY2 570 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 RPF2Q9H7B2 306 aaKnown RBP16.58■□□□□ 0.24
PHGDH-208ENST00000641023 TRNAU1APQ9NX07 287 aaKnown RBP16.58■□□□□ 0.24
PHGDH-208ENST00000641023 CA14Q9ULX7 337 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 ICKQ9UPZ9 632 aa16.58■□□□□ 0.24
PHGDH-208ENST00000641023 ELOVL7A1L3X0 281 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 C10orf142B7Z368 130 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 IGHV4-34P06331 123 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 CDKN2CP42773 168 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 ABATP80404 500 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 MTX3Q5HYI7 312 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 DEPDC1Q5TB30 811 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 KHDRBS2Q5VWX1 349 aaKnown RBP16.57■□□□□ 0.24
PHGDH-208ENST00000641023 PTCRAQ6ISU1 281 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-208ENST00000641023 TSTD1Q8NFU3 115 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.57■□□□□ 0.24
PHGDH-208ENST00000641023 MIEF2Q96C03 454 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 COQ8BQ96D53 544 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 CENPKQ9BS16 269 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 TMEM168Q9H0V1 697 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 REEP4Q9H6H4 257 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 GORASP2Q9H8Y8 452 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 ATAD3AQ9NVI7 634 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 SH3BP4Q9P0V3 963 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 DMTF1Q9Y222 760 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 MRPS17Q9Y2R5 130 aaKnown RBP16.57■□□□□ 0.24
PHGDH-208ENST00000641023 CROCCQ5TZA2 2017 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 TCRBV5S2A0A599 114 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 FEZF1A0PJY2 475 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 SOX1O00570 391 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-208ENST00000641023 TIPRLO75663 272 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 SEMA3DO95025 777 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 B3GALT4O96024 378 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 GBAP04062 536 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 KLK1P06870 262 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 HOXB9P17482 250 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-208ENST00000641023 GRK3P35626 688 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 AQP4P55087 323 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 CSNK1G2P78368 415 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 LEXMQ3ZCV2 418 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 ANKRD26P1Q6NSI1 321 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 SLC30A9Q6PML9 568 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 ERMP1Q7Z2K6 904 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 ABI3BPQ7Z7G0 1075 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 SLC9B2Q86UD5 537 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 ADGRG5Q8IZF4 528 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 ZNF548Q8NEK5 533 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-208ENST00000641023 TRPV3Q8NET8 790 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 FAM120BQ96EK7 910 aaKnown RBP16.57■□□□□ 0.24
PHGDH-208ENST00000641023 AURKBQ96GD4 344 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-208ENST00000641023 CPPED1Q9BRF8 314 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-208ENST00000641023 SEMA6AQ9H2E6 1030 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 MRPS30Q9NP92 439 aaKnown RBP16.57■□□□□ 0.24
PHGDH-208ENST00000641023 WSB2Q9NYS7 404 aaPredicted RBP16.57■□□□□ 0.24
PHGDH-208ENST00000641023 ANAPC2Q9UJX6 822 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 BTBD3Q9Y2F9 522 aa16.57■□□□□ 0.24
PHGDH-208ENST00000641023 OR1F1O43749 312 aa16.56■□□□□ 0.24
PHGDH-208ENST00000641023 ANXA6P08133 673 aa16.56■□□□□ 0.24
PHGDH-208ENST00000641023 FCGR1AP12314 374 aa16.56■□□□□ 0.24
PHGDH-208ENST00000641023 FASP25445 335 aa16.56■□□□□ 0.24
PHGDH-208ENST00000641023 SHMT2P34897 504 aa16.56■□□□□ 0.24
PHGDH-208ENST00000641023 POLE2P56282 527 aa16.56■□□□□ 0.24
PHGDH-208ENST00000641023 ALG11Q2TAA5 492 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms