RNA–Protein interactions for RNA: ENST00000639659.1

SYNE2-228, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-228ENST00000639659 PTGER1P34995 402 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 RPL22P35268 128 aaKnown RBP14.13□□□□□ -0.15
SYNE2-228ENST00000639659 RFC3P40938 356 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 OR4D2P58180 307 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 TAP2Q03519 686 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 GTF3C1Q12789 2109 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 NSDHLQ15738 373 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 TTLL9Q3SXZ7 439 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 H3F3CQ6NXT2 135 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 CEP128Q6ZU80 1094 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 GSTA5Q7RTV2 222 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 VN1R4Q7Z5H5 301 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 TMEM200AQ86VY9 491 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 DOLPP1Q86YN1 238 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 CYP4X1Q8N118 509 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 M1APQ8TC57 530 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 PANX2Q96RD6 677 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 SLC30A3Q99726 388 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 SPOCK3Q9BQ16 436 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 TRIM51Q9BSJ1 452 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 DESI2Q9BSY9 194 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 MMP25Q9NPA2 562 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 PCDHGB6Q9Y5F9 930 aa14.13□□□□□ -0.15
SYNE2-228ENST00000639659 FEZF1A0PJY2 475 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 CTAGE9A4FU28 777 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 E9PLN8 166 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 TFECO14948 347 aaPredicted RBP14.12□□□□□ -0.15
SYNE2-228ENST00000639659 PTMSP20962 102 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 COILP38432 576 aaPredicted RBP14.12□□□□□ -0.15
SYNE2-228ENST00000639659 BCL6P41182 706 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 RPS15AP62244 130 aaKnown RBP14.12□□□□□ -0.15
SYNE2-228ENST00000639659 KIF5AQ12840 1032 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 USP10Q14694 798 aaKnown RBP14.12□□□□□ -0.15
SYNE2-228ENST00000639659 TYSND1Q2T9J0 566 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 ZNF468Q5VIY5 522 aaPredicted RBP14.12□□□□□ -0.15
SYNE2-228ENST00000639659 CASC4Q6P4E1 433 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 SPNS3Q6ZMD2 512 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 CD163Q86VB7 1156 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 SIAH3Q8IW03 269 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 EID3Q8N140 333 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 KIF2BQ8N4N8 673 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 KCT2Q8NC54 265 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 CCDC138Q96M89 665 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 VKORC1Q9BQB6 163 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 CCDC68Q9H2F9 335 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 CCDC177Q9NQR7 707 aaPredicted RBP14.12□□□□□ -0.15
SYNE2-228ENST00000639659 CAPN6Q9Y6Q1 641 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 NF1P21359 2839 aa14.12□□□□□ -0.15
SYNE2-228ENST00000639659 ITPR3Q14573 2671 aa14.11□□□□□ -0.15
SYNE2-228ENST00000639659 NKX2-6A6NCS4 301 aa14.11□□□□□ -0.15
SYNE2-228ENST00000639659 NEURL1O76050 574 aa14.11□□□□□ -0.15
SYNE2-228ENST00000639659 NPY2RP49146 381 aa14.11□□□□□ -0.15
SYNE2-228ENST00000639659 ART1P52961 327 aa14.11□□□□□ -0.15
SYNE2-228ENST00000639659 SLC26A5P58743 744 aa14.11□□□□□ -0.15
SYNE2-228ENST00000639659 TBPL1P62380 186 aa14.11□□□□□ -0.15
SYNE2-228ENST00000639659 OLR1P78380 273 aa14.11□□□□□ -0.15
SYNE2-228ENST00000639659 RNFT1Q5M7Z0 435 aa14.11□□□□□ -0.15
SYNE2-228ENST00000639659 ASPGQ86U10 573 aa14.11□□□□□ -0.15
SYNE2-228ENST00000639659 PDSS2Q86YH6 399 aa14.11□□□□□ -0.15
SYNE2-228ENST00000639659 SLC13A5Q86YT5 568 aaPredicted RBP14.11□□□□□ -0.15
SYNE2-228ENST00000639659 PRELID2Q8N945 189 aa14.11□□□□□ -0.15
SYNE2-228ENST00000639659 CAMKVQ8NCB2 501 aa14.11□□□□□ -0.15
SYNE2-228ENST00000639659 OR5T3Q8NGG3 340 aa14.11□□□□□ -0.15
SYNE2-228ENST00000639659 PHF10Q8WUB8 498 aaKnown RBP14.11□□□□□ -0.15
SYNE2-228ENST00000639659 TMEM125Q96AQ2 219 aa14.11□□□□□ -0.15
SYNE2-228ENST00000639659 HES6Q96HZ4 224 aa14.11□□□□□ -0.15
SYNE2-228ENST00000639659 FRMD8P1Q9BZ68 369 aaPredicted RBP14.11□□□□□ -0.15
SYNE2-228ENST00000639659 EIF2B3Q9NR50 452 aaKnown RBP14.11□□□□□ -0.15
SYNE2-228ENST00000639659 FBXO6Q9NRD1 293 aaPredicted RBP14.11□□□□□ -0.15
SYNE2-228ENST00000639659 TMEM184CQ9NVA4 438 aa14.11□□□□□ -0.15
SYNE2-228ENST00000639659 DRG1Q9Y295 367 aaKnown RBP14.11□□□□□ -0.15
SYNE2-228ENST00000639659 NAALAD2Q9Y3Q0 740 aa14.11□□□□□ -0.15
SYNE2-228ENST00000639659 ZBTB14O43829 449 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 KIF5CO60282 957 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 NME2P1O60361 137 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 SERPIND1P05546 499 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 CYC1P08574 325 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 OGNP20774 298 aaKnown RBP14.1□□□□□ -0.15
SYNE2-228ENST00000639659 NME2P22392 152 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 TPP2P29144 1249 aaPredicted RBP14.1□□□□□ -0.15
SYNE2-228ENST00000639659 IMPA1P29218 277 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 ITGA8P53708 1063 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 ZNF470Q6ECI4 717 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 TMEM214Q6NUQ4 689 aaKnown RBP14.1□□□□□ -0.15
SYNE2-228ENST00000639659 UBE2R2Q712K3 238 aaPredicted RBP14.1□□□□□ -0.15
SYNE2-228ENST00000639659 PIWIL4Q7Z3Z4 852 aaKnown RBP14.1□□□□□ -0.15
SYNE2-228ENST00000639659 FGD2Q7Z6J4 655 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 SLC26A11Q86WA9 606 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 RPS19BP1Q86WX3 136 aaKnown RBP14.1□□□□□ -0.15
SYNE2-228ENST00000639659 GIMAP7Q8NHV1 300 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 DMRTA2Q96SC8 542 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 TCF12Q99081 682 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 KIFC1Q9BW19 673 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 ENKD1Q9H0I2 346 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 SH2B3Q9UQQ2 575 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 ASB1Q9Y576 335 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 MTORP42345 2549 aa14.1□□□□□ -0.15
SYNE2-228ENST00000639659 ZFHX3Q15911 3703 aa14.09□□□□□ -0.15
SYNE2-228ENST00000639659 A0A1B0GTH9 108 aa14.09□□□□□ -0.15
SYNE2-228ENST00000639659 A8MUA0 341 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms