RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 NDUFAF7Q7L592 441 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 KCT2Q8NC54 265 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 OR4K1Q8NGD4 311 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 FBF1Q8TES7 1133 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 NEIL2Q969S2 332 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 MIB2Q96AX9 1013 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 TM4SF19Q96DZ7 209 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 THOC3Q96J01 351 aaKnown RBP13.09□□□□□ -0.31
PNKP-228ENST00000637325 TSNARE1Q96NA8 513 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 AGAP4Q96P64 663 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 GPR22Q99680 433 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 AIF1LQ9BQI0 150 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 MCMBPQ9BTE3 642 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 LRRC1Q9BTT6 524 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 UNKQ9C0B0 810 aaKnown RBP13.09□□□□□ -0.31
PNKP-228ENST00000637325 TGIF2Q9GZN2 237 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 DERL2Q9GZP9 239 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 LHPPQ9H008 270 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 ZNF160Q9HCG1 818 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 LRRC4CQ9HCJ2 640 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 MKL2Q9ULH7 1088 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 SLC22A14Q9Y267 594 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 KCNE2Q9Y6J6 123 aa13.09□□□□□ -0.31
PNKP-228ENST00000637325 ESYT3A0FGR9 886 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 NCF1BA6NI72 391 aaPredicted RBP13.08□□□□□ -0.32
PNKP-228ENST00000637325 NCF1CA8MVU1 366 aaPredicted RBP13.08□□□□□ -0.32
PNKP-228ENST00000637325 SGK494L7N484 410 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 PCDH17O14917 1159 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 PHGDHO43175 533 aaKnown RBP13.08□□□□□ -0.32
PNKP-228ENST00000637325 NDUFS4O43181 175 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 VPS4BO75351 444 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 H2AFYO75367 372 aaKnown RBP13.08□□□□□ -0.32
PNKP-228ENST00000637325 UQCRHP07919 91 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 CCDC166P0CW27 439 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 NCF1P14598 390 aaPredicted RBP13.08□□□□□ -0.32
PNKP-228ENST00000637325 ATP6V0D1P61421 351 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 GUCY2DQ02846 1103 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 RGS1Q08116 209 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 SLMAPQ14BN4 828 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 RBBP5Q15291 538 aaKnown RBP13.08□□□□□ -0.32
PNKP-228ENST00000637325 KBTBD12Q3ZCT8 623 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 MINDY4Q4G0A6 757 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 ATG9BQ674R7 924 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 SLC6A19Q695T7 634 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 RAPH1Q70E73 1250 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 PRSS41Q7RTY9 318 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 TMPRSS11BQ86T26 416 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 ZC3H7AQ8IWR0 971 aaKnown RBP13.08□□□□□ -0.32
PNKP-228ENST00000637325 SPATA6LQ8N4H0 392 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 OR51Q1Q8NH59 317 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 METTL21AQ8WXB1 218 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 ILKAPQ9H0C8 392 aaPredicted RBP13.08□□□□□ -0.32
PNKP-228ENST00000637325 PELI2Q9HAT8 420 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 HCN3Q9P1Z3 774 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 VPS4AQ9UN37 437 aa13.08□□□□□ -0.32
PNKP-228ENST00000637325 SORBS2O94875 1100 aaKnown RBP13.07□□□□□ -0.32
PNKP-228ENST00000637325 WDR47O94967 919 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 BMP10O95393 424 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 S100BP04271 92 aaPredicted RBP13.07□□□□□ -0.32
PNKP-228ENST00000637325 VARSP26640 1264 aaKnown RBP13.07□□□□□ -0.32
PNKP-228ENST00000637325 XCR1P46094 333 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 RAB10P61026 200 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 SKP1P63208 163 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 PWP1Q13610 501 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 HERC3Q15034 1050 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 INPP5JQ15735 1006 aaPredicted RBP13.07□□□□□ -0.32
PNKP-228ENST00000637325 PLEKHN1Q494U1 663 aaPredicted RBP13.07□□□□□ -0.32
PNKP-228ENST00000637325 NXPE4Q6UWF7 544 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 IGFL3Q6UXB1 125 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 CEP128Q6ZU80 1094 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 GPSM1Q86YR5 675 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 KBTBD2Q8IY47 623 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 TCAIMQ8N3R3 496 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 ZNF740Q8NDX6 193 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 MNS1Q8NEH6 495 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 RHBDF1Q96CC6 855 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 MESP1Q9BRJ9 268 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 SARGQ9BW04 601 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 EPS8L2Q9H6S3 715 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 CNOT10Q9H9A5 744 aaKnown RBP13.07□□□□□ -0.32
PNKP-228ENST00000637325 WWOXQ9NZC7 414 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 MTRF1LQ9UGC7 380 aaKnown RBP13.07□□□□□ -0.32
PNKP-228ENST00000637325 ZFP69BQ9UJL9 534 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 B3GNT3Q9Y2A9 372 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 NAALAD2Q9Y3Q0 740 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 SLC22A7Q9Y694 548 aa13.07□□□□□ -0.32
PNKP-228ENST00000637325 UBR5O95071 2799 aaPredicted RBP13.07□□□□□ -0.32
PNKP-228ENST00000637325 CPAMD8Q8IZJ3 1885 aa13.06□□□□□ -0.32
PNKP-228ENST00000637325 URADA6NGE7 173 aa13.06□□□□□ -0.32
PNKP-228ENST00000637325 RDH16O75452 317 aa13.06□□□□□ -0.32
PNKP-228ENST00000637325 JRKO75564 520 aa13.06□□□□□ -0.32
PNKP-228ENST00000637325 FAM155BO75949 473 aa13.06□□□□□ -0.32
PNKP-228ENST00000637325 KLHL18O94889 574 aa13.06□□□□□ -0.32
PNKP-228ENST00000637325 TUBB4AP04350 444 aa13.06□□□□□ -0.32
PNKP-228ENST00000637325 C8orf89P0DMQ9 161 aa13.06□□□□□ -0.32
PNKP-228ENST00000637325 COX6A1P12074 109 aa13.06□□□□□ -0.32
PNKP-228ENST00000637325 CD1DP15813 335 aa13.06□□□□□ -0.32
PNKP-228ENST00000637325 GNAZP19086 355 aa13.06□□□□□ -0.32
PNKP-228ENST00000637325 AHRP35869 848 aa13.06□□□□□ -0.32
PNKP-228ENST00000637325 SCTRP47872 440 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms