RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 ZBTB49Q6ZSB9 765 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 SELENOMQ8WWX9 145 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 PKP4Q99569 1192 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 ZNF576Q9H609 170 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 TRIM39Q9HCM9 518 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 DNAJC11Q9NVH1 559 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 B3GNT3Q9Y2A9 372 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 KIAA1549LQ6ZVL6 1849 aa11.12□□□□□ -0.63
CLN6-217ENST00000636964 FAM149AA5PLN7 773 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 RGS14O43566 566 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 LILRB5O75023 590 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 PSIP1O75475 530 aaKnown RBP11.11□□□□□ -0.63
CLN6-217ENST00000636964 PAK4O96013 591 aaPredicted RBP11.11□□□□□ -0.63
CLN6-217ENST00000636964 S100A6P06703 90 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 ABCB1P08183 1280 aaPredicted RBP11.11□□□□□ -0.63
CLN6-217ENST00000636964 JAK1P23458 1154 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 HNMTP50135 292 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 EMX2Q04743 252 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 CHIT1Q13231 466 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 NFYCQ13952 458 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 NEDD8Q15843 81 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 AGBL4Q5VU57 503 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 AGTRAPQ6RW13 159 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 NUDT18Q6ZVK8 323 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 SLC51BQ86UW2 128 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 HEATR4Q86WZ0 1026 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 CBR4Q8N4T8 237 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 RIPOR3Q96MK2 946 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 HDAC8Q9BY41 377 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 BRINP2Q9C0B6 783 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 MKRN2Q9H000 416 aaKnown RBP11.11□□□□□ -0.63
CLN6-217ENST00000636964 ACTL8Q9H568 366 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 MBNL1Q9NR56 388 aaKnown RBP11.11□□□□□ -0.63
CLN6-217ENST00000636964 TM7SF3Q9NS93 570 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 TRPS1Q9UHF7 1281 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 SLC16A5O15375 505 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 OR5F1O95221 314 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 HPCAL1P37235 193 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 IST1P53990 364 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 AP1S2P56377 157 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 WSCD2Q2TBF2 565 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 SLC36A3Q495N2 470 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 PERM1Q5SV97 790 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 LRRC70Q7Z2Q7 622 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 PIWIL3Q7Z3Z3 882 aaKnown RBP11.11□□□□□ -0.63
CLN6-217ENST00000636964 THOC6Q86W42 341 aaKnown RBP11.11□□□□□ -0.63
CLN6-217ENST00000636964 IFNEQ86WN2 208 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 SLC22A15Q8IZD6 547 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 ANKFN1Q8N957 763 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 CSGALNACT1Q8TDX6 532 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 ACPTQ9BZG2 426 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 ELOVL6Q9H5J4 265 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 PIF1Q9H611 641 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 STOX2Q9P2F5 926 aaPredicted RBP11.11□□□□□ -0.63
CLN6-217ENST00000636964 SUCOQ9UBS9 1254 aaKnown RBP11.11□□□□□ -0.63
CLN6-217ENST00000636964 KLHL3Q9UH77 587 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 OR1A2Q9Y585 309 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 A0A1W2PP18 115 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 ZNF839A8K0R7 811 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 H3BQ06 376 aaPredicted RBP11.11□□□□□ -0.63
CLN6-217ENST00000636964 CATP04040 527 aaKnown RBP11.11□□□□□ -0.63
CLN6-217ENST00000636964 KIR2DL1P43626 348 aaPredicted RBP11.11□□□□□ -0.63
CLN6-217ENST00000636964 DPTQ07507 201 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 DDX39BQ13838 428 aaKnown RBP11.11□□□□□ -0.63
CLN6-217ENST00000636964 GTF2H3Q13889 308 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 RCAN2Q14206 197 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 TRIM16LQ309B1 348 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 RABL3Q5HYI8 236 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 FAM83HQ6ZRV2 1179 aaPredicted RBP11.11□□□□□ -0.63
CLN6-217ENST00000636964 TCAIMQ8N3R3 496 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 C2orf73Q8N5S3 287 aaPredicted RBP11.11□□□□□ -0.63
CLN6-217ENST00000636964 CANT1Q8WVQ1 401 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 LRRC58Q96CX6 371 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 NRTNQ99748 197 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 MYOCQ99972 504 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 ADI1Q9BV57 179 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 LRTM1Q9HBL6 345 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 TMEM181Q9P2C4 612 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 DAPK2Q9UIK4 370 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 GPSM3Q9Y4H4 160 aa11.11□□□□□ -0.63
CLN6-217ENST00000636964 FXYD1O00168 92 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 NME4O00746 187 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 PRMT3O60678 531 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 KRT6AP02538 564 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 KRT6BP04259 564 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 SLC7A1P30825 629 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 EIF2DP41214 584 aaKnown RBP11.1□□□□□ -0.63
CLN6-217ENST00000636964 GNPDA1P46926 289 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 KRT6CP48668 564 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 CLK3P49761 638 aaKnown RBP11.1□□□□□ -0.63
CLN6-217ENST00000636964 IRF8Q02556 426 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 AQP6Q13520 282 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 XKR6Q5GH73 641 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 CDKL4Q5MAI5 379 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 ARMC4Q5T2S8 1044 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 PNCKQ6P2M8 343 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 TDHQ8IZJ6 230 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 LIX1Q8N485 282 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 KRTCAP2Q8N6L1 136 aa11.1□□□□□ -0.63
CLN6-217ENST00000636964 OR13F1Q8NGS4 319 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms