RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 RPE65Q16518 533 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 PDK4Q16654 411 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 HKDC1Q2TB90 917 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 USH1GQ495M9 461 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 PLK5Q496M5 336 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 RUNDC3AQ59EK9 446 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 PAGE2BQ5JRK9 111 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 Q5PR19 223 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 PHYHD1Q5SRE7 291 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 C9orf50Q5SZB4 431 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 ZNF658Q5TYW1 1059 aaPredicted RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 LCN1P1Q5VSP4 162 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 FAM171A1Q5VUB5 890 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 LRRC66Q68CR7 880 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 NCR3LG1Q68D85 454 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 BRAT1Q6PJG6 821 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 TRILQ7L0X0 811 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 AACSQ86V21 672 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 MISPQ8IVT2 679 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 CCDC60Q8IWA6 550 aaPredicted RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 UEVLDQ8IX04 471 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 GPR65Q8IYL9 337 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 C16orf71Q8IYS4 520 aaPredicted RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 HACE1Q8IYU2 909 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 ST13P4Q8IZP2 240 aaPredicted RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 PLD5Q8N7P1 536 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 ZNF781Q8N8C0 355 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 FAM47BQ8NA70 645 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 ICA1LQ8NDH6 482 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 TMEM185AQ8NFB2 350 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 CADM4Q8NFZ8 388 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 OR8J2Q8NGG1 315 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 OR56B1Q8NGI3 324 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 OR52B4Q8NGK2 314 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 NCOA7Q8NI08 942 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 C9orf43Q8TAL5 461 aaPredicted RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 BBS10Q8TAM1 723 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 NDNFQ8TB73 568 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 PSPC1Q8WXF1 523 aaKnown RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 RAB40AQ8WXH6 277 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 DDB2Q92466 427 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 PIGKQ92643 395 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 CIDECQ96AQ7 238 aaPredicted RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 KIAA1143Q96AT1 154 aaPredicted RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 HAVCR1Q96D42 359 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 MED30Q96HR3 178 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 LURAP1Q96LR2 239 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 KLHL15Q96M94 604 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 ZNF558Q96NG5 402 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 FRG2BQ96QU4 278 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 OR2A14Q96R47 310 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 CHP1Q99653 195 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 CGREF1Q99674 301 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 SLC29A1Q99808 456 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 CCM2Q9BSQ5 444 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.83□□□□□ -1.967e-6■□□□□ 8.3
PSPC1-208ENST00000635562 NUP58Q9BVL2 599 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 SPATA16Q9BXB7 569 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 EGLN1Q9GZT9 426 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 DNTTIP1Q9H147 329 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 BLZF1Q9H2G9 400 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 LRMDAQ9H2I8 198 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 HRH4Q9H3N8 390 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 RGCCQ9H4X1 137 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 C12orf10Q9HB07 376 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 NEK6Q9HC98 313 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 MOV10Q9HCE1 1003 aaKnown RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 MRPL47Q9HD33 250 aaKnown RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 C8orf4Q9NR00 106 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 TUBG2Q9NRH3 451 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 RRP7BPQ9NSQ0 103 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 ALKBH4Q9NXW9 302 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 EURLQ9NYK6 297 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 TAS2R7Q9NYW3 318 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 OR6C3Q9NZP0 311 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 HEY2Q9UBP5 337 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 HAO1Q9UJM8 370 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 MKLN1Q9UL63 735 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 STAP1Q9ULZ2 295 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 PLAGL1Q9UM63 463 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 KCNK6Q9Y257 313 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 NCKAP1Q9Y2A7 1128 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 ZNF510Q9Y2H8 683 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 PADI2Q9Y2J8 665 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 WBP11Q9Y2W2 641 aaKnown RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 BZW2Q9Y6E2 419 aaKnown RBP2.83□□□□□ -1.96
PSPC1-208ENST00000635562 MAU2Q9Y6X3 613 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 MAPK8IP3Q9UPT6 1336 aa2.83□□□□□ -1.96
PSPC1-208ENST00000635562 TEX13CA0A0J9YWL9 993 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 A0A1B0GUL7 405 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 C13orf42A0A1B0GVH6 325 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 FAM240BA0A1B0GVZ2 78 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 A0A1W2PRG0 241 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 C17orf102A2RUQ5 167 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 ANKDD1BA6NHY2 528 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 GOLGA8JA6NMD2 632 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 GOLGA8TH3BQL2 631 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 GOLGA8RI6L899 631 aa2.82□□□□□ -1.96
PSPC1-208ENST00000635562 NR5A2O00482 541 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms