RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ACHEP22303 614 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 SP100P23497 879 aaPredicted RBP2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 FCARP24071 287 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 HRH2P25021 359 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 NMBRP28336 390 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 BDKRB2P30411 391 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 HOXC13P31276 330 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 TLX1P31314 330 aaPredicted RBP2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 SFNP31947 248 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 ENTPD1P49961 510 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 NPY4RP50391 375 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 LIMK1P53667 647 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 NAPAP54920 295 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 CDH13P55290 713 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 HNRNPH2P55795 449 aaKnown RBP2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 STARD6P59095 220 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 PPP2R2BQ00005 443 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 GAGE2BQ13066 116 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 PPP2R5CQ13362 524 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 GIT2Q14161 759 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 ZNF273Q14593 569 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 PTPRCAPQ14761 206 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 NR1D2Q14995 579 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 ANGPT1Q15389 498 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 MEP1AQ16819 746 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 ZNF528Q3MIS6 628 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 GAGE2EQ4V326 116 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 DNTTIP2Q5QJE6 756 aaKnown RBP2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 C6orf163Q5TEZ5 329 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 OTUD1Q5VV17 481 aaPredicted RBP2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 ZDHHC20Q5W0Z9 365 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 GAGE2AQ6NT46 116 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 CAVIN1Q6NZI2 390 aaKnown RBP2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 KCTD18Q6PI47 426 aaPredicted RBP2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 CASC1Q6TDU7 716 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 FAM198BQ6UWH4 519 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 SLC36A4Q6YBV0 504 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 ADCK2Q7Z695 626 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 CENPVQ7Z7K6 275 aaPredicted RBP2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 ZC3HC1Q86WB0 502 aaKnown RBP2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 PLA2G4DQ86XP0 818 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 PCDH20Q8N6Y1 951 aaKnown RBP2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 IQUBQ8NA54 791 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 ZBTB44Q8NCP5 570 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 C7orf57Q8NEG2 295 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 EXD1Q8NHP7 514 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 GDAP1Q8TB36 358 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 MAGEC3Q8TD91 643 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 OIT3Q8WWZ8 545 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 CLDN23Q96B33 292 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 RHBDF1Q96CC6 855 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 URB1-AS1Q96HZ7 61 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 TCEANC2Q96MN5 208 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 KLHL5Q96PQ7 755 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 SLC22A12Q96S37 553 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 MYADMQ96S97 322 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 EGFL8Q99944 293 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 GPATCH1Q9BRR8 931 aaKnown RBP2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 TMEM175Q9BSA9 504 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 ZNF577Q9BSK1 485 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 ABHD6Q9BV23 337 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 NFKBIZQ9BYH8 718 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 SPRY4Q9C004 299 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 RAD21L1Q9H4I0 556 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 CNOT10Q9H9A5 744 aaKnown RBP2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 PLAC1Q9HBJ0 212 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 EQTNQ9NQ60 294 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 XPNPEP1Q9NQW7 623 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 WNT16Q9UBV4 365 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 GAGE2DQ9UEU5 116 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 TINAGQ9UJW2 476 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 PCDHA7Q9UN72 937 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 FLNCQ14315 2725 aa2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 FLNBO75369 2602 aaKnown RBP2.38□□□□□ -2.03
SMARCB1-208ENST00000634926 A0A087WV48 116 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 TRAV34A0A0B4J273 112 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 IGHV4-28A0A0C4DH34 117 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 KLF18A0A0U1RQI7 1052 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 A0A1W2PPM1 405 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 ARL5CA6NH57 179 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 CCDC69A6NI79 296 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 ANXA2P2A6NMY6 339 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 ERI2A8K979 691 aaKnown RBP2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 BECN2A8MW95 431 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 TMEM189-UBE2V1I3L0A0 370 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 J3QR06 171 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 DDX39AO00148 427 aaKnown RBP2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 HS3ST1O14792 307 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 DIAPH2O60879 1101 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 NDUFS7O75251 213 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 CSDE1O75534 798 aaKnown RBP2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 RFPL2O75678 378 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 PAPSS2O95340 614 aaPredicted RBP2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 LYPLA2O95372 231 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 BAG2O95816 211 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 LCATP04180 440 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 CYP1A2P05177 515 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 EDN1P05305 212 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 UMODP07911 640 aa2.37□□□□□ -2.03
SMARCB1-208ENST00000634926 DANCRP0C864 163 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms