RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 C12orf66Q96MD2 445 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 SPATA9Q9BWV2 254 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 OR51B5Q9H339 312 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 AHSPQ9NZD4 102 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 OAZ3Q9UMX2 235 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 BTBD3Q9Y2F9 522 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 WDR37Q9Y2I8 494 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 PCDHB11Q9Y5F2 797 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 VGLL3A8MV65 326 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 RNASET2O00584 256 aaKnown RBP21.19■□□□□ 0.98
PNKP-220ENST00000627232 SEMA3DO95025 777 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 FAM58BPP0C7Q3 252 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 ENGP17813 658 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 CCR8P51685 355 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 KIAA1024LP59773 190 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 REEP5Q00765 189 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 NHSL2Q5HYW2 709 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 ZNF621Q6ZSS3 439 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 PGBD3Q8N328 593 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 C2orf73Q8N5S3 287 aaPredicted RBP21.19■□□□□ 0.98
PNKP-220ENST00000627232 ZNF740Q8NDX6 193 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 DENND6BQ8NEG7 585 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 OR4K1Q8NGD4 311 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 SNX19Q92543 992 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 MTERF3Q96E29 417 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 CAMK1GQ96NX5 476 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 OSGEPL1Q9H4B0 414 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 MVB12BQ9H7P6 319 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 ATAD3AQ9NVI7 634 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 CD207Q9UJ71 328 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 CORO2BQ9UQ03 480 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 V9GYQ6 96 aa21.19■□□□□ 0.98
PNKP-220ENST00000627232 RNF103-CHMP3A0A140T963 221 aa21.18■□□□□ 0.98
PNKP-220ENST00000627232 A0A1W2PPV9 198 aa21.18■□□□□ 0.98
PNKP-220ENST00000627232 CPSF4O95639 269 aaKnown RBP21.18■□□□□ 0.98
PNKP-220ENST00000627232 PDE7AQ13946 482 aa21.18■□□□□ 0.98
PNKP-220ENST00000627232 CPZQ66K79 652 aa21.18■□□□□ 0.98
PNKP-220ENST00000627232 IKBIPQ70UQ0 350 aa21.18■□□□□ 0.98
PNKP-220ENST00000627232 CARM1Q86X55 608 aa21.18■□□□□ 0.98
PNKP-220ENST00000627232 CLECL1Q8IZS7 167 aa21.18■□□□□ 0.98
PNKP-220ENST00000627232 C10orf111Q8N326 155 aa21.18■□□□□ 0.98
PNKP-220ENST00000627232 C16orf78Q8WTQ4 265 aa21.18■□□□□ 0.98
PNKP-220ENST00000627232 NCLNQ969V3 563 aa21.18■□□□□ 0.98
PNKP-220ENST00000627232 CXorf56Q9H5V9 222 aa21.18■□□□□ 0.98
PNKP-220ENST00000627232 ZNF696Q9H7X3 374 aa21.18■□□□□ 0.98
PNKP-220ENST00000627232 SUFUQ9UMX1 484 aa21.18■□□□□ 0.98
PNKP-220ENST00000627232 EXO1Q9UQ84 846 aaKnown RBP21.18■□□□□ 0.98
PNKP-220ENST00000627232 MTCH2Q9Y6C9 303 aa21.18■□□□□ 0.98
PNKP-220ENST00000627232 ANKDD1BA6NHY2 528 aa21.17■□□□□ 0.98
PNKP-220ENST00000627232 YY2O15391 372 aa21.17■□□□□ 0.98
PNKP-220ENST00000627232 TNFAIP8O95379 198 aa21.17■□□□□ 0.98
PNKP-220ENST00000627232 RBBP5Q15291 538 aaKnown RBP21.17■□□□□ 0.98
PNKP-220ENST00000627232 MLF2Q15773 248 aaPredicted RBP21.17■□□□□ 0.98
PNKP-220ENST00000627232 EOGTQ5NDL2 527 aa21.17■□□□□ 0.98
PNKP-220ENST00000627232 FAM71E1Q6IPT2 247 aa21.17■□□□□ 0.98
PNKP-220ENST00000627232 ANKRD26P1Q6NSI1 321 aa21.17■□□□□ 0.98
PNKP-220ENST00000627232 DUS1LQ6P1R4 473 aaKnown RBP21.17■□□□□ 0.98
PNKP-220ENST00000627232 ENPP6Q6UWR7 440 aa21.17■□□□□ 0.98
PNKP-220ENST00000627232 EID3Q8N140 333 aa21.17■□□□□ 0.98
PNKP-220ENST00000627232 GOT1L1Q8NHS2 421 aaPredicted RBP21.17■□□□□ 0.98
PNKP-220ENST00000627232 WDR48Q8TAF3 677 aa21.17■□□□□ 0.98
PNKP-220ENST00000627232 FBXO30Q8TB52 745 aa21.17■□□□□ 0.98
PNKP-220ENST00000627232 TFAP2CQ92754 450 aa21.17■□□□□ 0.98
PNKP-220ENST00000627232 SLC47A1Q96FL8 570 aa21.17■□□□□ 0.98
PNKP-220ENST00000627232 ACAT2Q9BWD1 397 aa21.17■□□□□ 0.98
PNKP-220ENST00000627232 ANKRD60Q9BZ19 345 aa21.17■□□□□ 0.98
PNKP-220ENST00000627232 KCNK6Q9Y257 313 aa21.17■□□□□ 0.98
PNKP-220ENST00000627232 WBP11Q9Y2W2 641 aaKnown RBP21.17■□□□□ 0.98
PNKP-220ENST00000627232 PDLIM1O00151 329 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 CCNDBP1O95273 360 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 FURINP09958 794 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 LINGO3P0C6S8 592 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 ACADMP11310 421 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 PKLRP30613 574 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 MAT2AP31153 395 aaKnown RBP21.16■□□□□ 0.98
PNKP-220ENST00000627232 RAB28P51157 221 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 PPP2CBP62714 309 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 PPP2CAP67775 309 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 SLC14A1Q13336 389 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 UAP1L1Q3KQV9 507 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 ZNF551Q7Z340 670 aaPredicted RBP21.16■□□□□ 0.98
PNKP-220ENST00000627232 SLC9B2Q86UD5 537 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 TRIM69Q86WT6 500 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 OR2L8Q8NGY9 312 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 NETO1Q8TDF5 533 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 VPS50Q96JG6 964 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 MRGPRX1Q96LB2 322 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 MS4A8Q9BY19 250 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 CARS2Q9HA77 564 aaKnown RBP21.16■□□□□ 0.98
PNKP-220ENST00000627232 SH3BP4Q9P0V3 963 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 DNAJB9Q9UBS3 223 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 ZNF282Q9UDV7 671 aaPredicted RBP21.16■□□□□ 0.98
PNKP-220ENST00000627232 VPS4AQ9UN37 437 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 GPSM3Q9Y4H4 160 aa21.16■□□□□ 0.98
PNKP-220ENST00000627232 C1orf226A1L170 272 aa21.15■□□□□ 0.98
PNKP-220ENST00000627232 DLGAP1O14490 977 aa21.15■□□□□ 0.98
PNKP-220ENST00000627232 SLC31A1O15431 190 aa21.15■□□□□ 0.98
PNKP-220ENST00000627232 KLHL18O94889 574 aa21.15■□□□□ 0.98
PNKP-220ENST00000627232 MYBPC1Q00872 1141 aa21.15■□□□□ 0.98
PNKP-220ENST00000627232 FBXO43Q4G163 708 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms