RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 IFT88Q13099 833 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 TUBB3Q13509 450 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 SGO1Q5FBB7 561 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 KANK2Q63ZY3 851 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 FAM47EQ6ZV65 393 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 RAB11FIP2Q7L804 512 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 TMPRSS12Q86WS5 348 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 MCATQ8IVS2 390 aaKnown RBP8.14□□□□□ -1.11
SGMS1-211ENST00000626236 LAS2Q8IYD9 372 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 OR4N4Q8N0Y3 316 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 RNF175Q8N4F7 328 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 ANKRD53Q8N9V6 530 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 AGBL5Q8NDL9 886 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 ADAMTS14Q8WXS8 1223 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 CCT6BQ92526 530 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 THAP11Q96EK4 314 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 LIN37Q96GY3 246 aaPredicted RBP8.14□□□□□ -1.11
SGMS1-211ENST00000626236 OR2A5Q96R48 311 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 OR6C1Q96RD1 312 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 MTERF1Q99551 399 aaKnown RBP8.14□□□□□ -1.11
SGMS1-211ENST00000626236 CMKLR1Q99788 373 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 MACROD1Q9BQ69 325 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 SARGQ9BW04 601 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 PRR14Q9BWN1 585 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 CHRNA10Q9GZZ6 450 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 ILKAPQ9H0C8 392 aaPredicted RBP8.14□□□□□ -1.11
SGMS1-211ENST00000626236 ELOVL6Q9H5J4 265 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 NT5DC2Q9H857 520 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 SLCO1B3Q9NPD5 702 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 PNPOQ9NVS9 261 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 IRAK4Q9NWZ3 460 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 OCIAD1Q9NX40 245 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 SNX6Q9UNH7 406 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 RAP2CQ9Y3L5 183 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 LOXL2Q9Y4K0 774 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 TRAF6Q9Y4K3 522 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 AP1M2Q9Y6Q5 423 aa8.14□□□□□ -1.11
SGMS1-211ENST00000626236 CCDC187A0A096LP49 1063 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 ANKDD1BA6NHY2 528 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 MANBAO00462 879 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 P2RX6O15547 441 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 HYAL3O43820 417 aaPredicted RBP8.13□□□□□ -1.11
SGMS1-211ENST00000626236 SH3BGRLO75368 114 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 ULK1O75385 1050 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 SKAP2O75563 359 aaPredicted RBP8.13□□□□□ -1.11
SGMS1-211ENST00000626236 CHEK2O96017 543 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 PDYNP01213 254 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 KRT6AP02538 564 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 KRT6BP04259 564 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 SLC35G6P0C7Q6 338 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 CCL4P13236 92 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 SERPINB1P30740 379 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 GABRA4P48169 554 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 KRT6CP48668 564 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 HTR6P50406 440 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 RPL14P50914 215 aaKnown RBP8.13□□□□□ -1.11
SGMS1-211ENST00000626236 MAPK10P53779 464 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 PHEXP78562 749 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 ACY1Q03154 408 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 KCNC4Q03721 635 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 RELAQ04206 551 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 TARDBPQ13148 414 aaKnown RBP eCLIP8.13□□□□□ -1.11
SGMS1-211ENST00000626236 PDCD2Q16342 344 aaPredicted RBP8.13□□□□□ -1.11
SGMS1-211ENST00000626236 KIF26BQ2KJY2 2108 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 C3orf38Q5JPI3 329 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 FRG2Q64ET8 278 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 CYB5D1Q6P9G0 228 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 FOXR1Q6PIV2 292 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 SCIMPQ6UWF3 145 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 RGS9BPQ6ZS82 235 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 VN1R5Q7Z5H4 357 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 VN1R4Q7Z5H5 301 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 ASPGQ86U10 573 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 MARCH9Q86YJ5 346 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 CRLF3Q8IUI8 442 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 DDIASQ8IXT1 998 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 CLYBLQ8N0X4 340 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 GALNT15Q8N3T1 639 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 CHCHD4Q8N4Q1 142 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 AFAP1L2Q8N4X5 818 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 ZNF655Q8N720 491 aaPredicted RBP8.13□□□□□ -1.11
SGMS1-211ENST00000626236 CSNK1A1LQ8N752 337 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 TRPV3Q8NET8 790 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 TTLQ8NG68 377 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 OR7G3Q8NG95 312 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 HUS1BQ8NHY5 278 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 WDR20Q8TBZ3 569 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 SLC13A3Q8WWT9 602 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 SELENOMQ8WWX9 145 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 ZNF501Q96CX3 271 aaPredicted RBP8.13□□□□□ -1.11
SGMS1-211ENST00000626236 C7orf26Q96N11 449 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 FRG2BQ96QU4 278 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 HBEGFQ99075 208 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 CTRCQ99895 268 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 FAM117AQ9C073 453 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 RHBGQ9H310 441 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 CCDC134Q9H6E4 229 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 FGF21Q9NSA1 209 aa8.13□□□□□ -1.11
SGMS1-211ENST00000626236 FARSBQ9NSD9 589 aaKnown RBP8.13□□□□□ -1.11
SGMS1-211ENST00000626236 STARD5Q9NSY2 213 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms