RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 IST1P53990 364 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 ABATP80404 500 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 TBX2Q13207 712 aaPredicted RBP13.8□□□□□ -0.2
PNKP-218ENST00000625299 KCNJ11Q14654 390 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 USP10Q14694 798 aaKnown RBP13.8□□□□□ -0.2
PNKP-218ENST00000625299 PCID2Q5JVF3 399 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 MEI1Q5TIA1 1274 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 RPS19BP1Q86WX3 136 aaKnown RBP13.8□□□□□ -0.2
PNKP-218ENST00000625299 CCDC170Q8IYT3 715 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 KIF2BQ8N4N8 673 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 UBL4BQ8N7F7 174 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 TC2NQ8N9U0 490 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 ZNF480Q8WV37 535 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 ASB5Q8WWX0 329 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 TMEM125Q96AQ2 219 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 PEX11GQ96HA9 241 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 BIRC8Q96P09 236 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 OLFM1Q99784 485 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 ANKHQ9HCJ1 492 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 GALPQ9UBC7 116 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 AMFRQ9UKV5 643 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 RNF6Q9Y252 685 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 CRYL1Q9Y2S2 319 aa13.8□□□□□ -0.2
PNKP-218ENST00000625299 PRRC2AP48634 2157 aaKnown RBP13.8□□□□□ -0.2
PNKP-218ENST00000625299 E5RI56 91 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 E7ENX8 843 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 ZWINTO95229 277 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 MSX1P28360 303 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 CHRNB4P30926 498 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 HSD17B2P37059 387 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 CYB561P49447 251 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 MEOX1P50221 254 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 ITGA8P53708 1063 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 OR4D2P58180 307 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 SLC26A5P58743 744 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 PPP2R2AP63151 447 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 TAP2Q03519 686 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 GBX1Q14549 363 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 CES4AQ5XG92 561 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 TMEM211Q6ICI0 200 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 CES3Q6UWW8 571 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 PEX26Q7Z412 305 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 VN1R4Q7Z5H5 301 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 SDCCAG8Q86SQ7 713 aaPredicted RBP13.79□□□□□ -0.2
PNKP-218ENST00000625299 CYP4X1Q8N118 509 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 LGI4Q8N135 537 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 LPGAT1Q92604 370 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 CALR3Q96L12 384 aaKnown RBP13.79□□□□□ -0.2
PNKP-218ENST00000625299 KCNJ16Q9NPI9 418 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 TREX1Q9NSU2 369 aa13.79□□□□□ -0.2
PNKP-218ENST00000625299 AKAP6Q13023 2319 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 USP27XA6NNY8 438 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 H3BMM5 538 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 HS6ST1O60243 411 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 PRMT3O60678 531 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 VAPBO95292 243 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 IPO7O95373 1038 aaKnown RBP13.78□□□□□ -0.2
PNKP-218ENST00000625299 DRD2P14416 443 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 STIP1P31948 543 aaKnown RBP13.78□□□□□ -0.2
PNKP-218ENST00000625299 RPS15AP62244 130 aaKnown RBP13.78□□□□□ -0.2
PNKP-218ENST00000625299 RHAGQ02094 409 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 RELAQ04206 551 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 TFF3Q07654 80 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 MRNIPQ6NTE8 343 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 TMEM214Q6NUQ4 689 aaKnown RBP13.78□□□□□ -0.2
PNKP-218ENST00000625299 PDSS2Q86YH6 399 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 CCDC71Q8IV32 467 aaPredicted RBP13.78□□□□□ -0.2
PNKP-218ENST00000625299 SPNS2Q8IVW8 549 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 REXO1L1PQ8IX06 675 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 DMRTC2Q8IXT2 367 aaPredicted RBP13.78□□□□□ -0.2
PNKP-218ENST00000625299 RPRMLQ8N4K4 120 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 LRRC57Q8N9N7 239 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 CHDHQ8NE62 594 aaPredicted RBP13.78□□□□□ -0.2
PNKP-218ENST00000625299 RND1Q92730 232 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 CCDC138Q96M89 665 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 ZNF148Q9UQR1 794 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 NAALAD2Q9Y3Q0 740 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 HRH3Q9Y5N1 445 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 MAP1AP78559 2803 aaPredicted RBP13.78□□□□□ -0.2
PNKP-218ENST00000625299 ACANP16112 2415 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 ABCA2Q9BZC7 2435 aa13.78□□□□□ -0.2
PNKP-218ENST00000625299 DNHD1Q96M86 4753 aa13.77□□□□□ -0.2
PNKP-218ENST00000625299 FEZF1A0PJY2 475 aa13.77□□□□□ -0.21
PNKP-218ENST00000625299 PFDN6O15212 129 aa13.77□□□□□ -0.21
PNKP-218ENST00000625299 KIF5CO60282 957 aa13.77□□□□□ -0.21
PNKP-218ENST00000625299 PDE9AO76083 593 aa13.77□□□□□ -0.21
PNKP-218ENST00000625299 TOXO94900 526 aa13.77□□□□□ -0.21
PNKP-218ENST00000625299 FTCDO95954 541 aa13.77□□□□□ -0.21
PNKP-218ENST00000625299 ESR1P03372 595 aa13.77□□□□□ -0.21
PNKP-218ENST00000625299 TFEBP19484 476 aa13.77□□□□□ -0.21
PNKP-218ENST00000625299 KLK2P20151 261 aa13.77□□□□□ -0.21
PNKP-218ENST00000625299 SNX1Q13596 522 aa13.77□□□□□ -0.21
PNKP-218ENST00000625299 CUL1Q13616 776 aa13.77□□□□□ -0.21
PNKP-218ENST00000625299 RNF187Q5TA31 235 aaPredicted RBP13.77□□□□□ -0.21
PNKP-218ENST00000625299 ZNF227Q86WZ6 799 aa13.77□□□□□ -0.21
PNKP-218ENST00000625299 TGIF2LYQ8IUE0 185 aa13.77□□□□□ -0.21
PNKP-218ENST00000625299 CCDC89Q8N998 374 aa13.77□□□□□ -0.21
PNKP-218ENST00000625299 POGLUT1Q8NBL1 392 aa13.77□□□□□ -0.21
PNKP-218ENST00000625299 KCT2Q8NC54 265 aa13.77□□□□□ -0.21
PNKP-218ENST00000625299 RNF214Q8ND24 703 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms