RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 GOLGA6L6A8MZA4 724 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 KIF5CO60282 957 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 RDH16O75452 317 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 CDC123O75794 336 aaPredicted RBP17.88■□□□□ 0.45
SMN1-211ENST00000625245 CD46P15529 392 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 EEF1DP29692 281 aaKnown RBP17.88■□□□□ 0.45
SMN1-211ENST00000625245 PTGER4P35408 488 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 COILP38432 576 aaPredicted RBP17.88■□□□□ 0.45
SMN1-211ENST00000625245 CD96P40200 585 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 SLC1A2P43004 574 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 SMSP52788 366 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 OC90Q02509 493 aaPredicted RBP17.88■□□□□ 0.45
SMN1-211ENST00000625245 OR1C1Q15619 314 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 EXT1Q16394 746 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 SFT2D3Q587I9 215 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 ARMC3Q5W041 872 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 SPINK14Q6IE38 97 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 H3F3CQ6NXT2 135 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 PAPD4Q6PIY7 484 aaKnown RBP17.88■□□□□ 0.45
SMN1-211ENST00000625245 ASPGQ86U10 573 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 C17orf64Q86WR6 236 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 GAS2L3Q86XJ1 694 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 KCT2Q8NC54 265 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 M1APQ8TC57 530 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 CD200R1Q8TD46 325 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 PCBD2Q9H0N5 130 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 SH2B3Q9UQQ2 575 aa17.88■□□□□ 0.45
SMN1-211ENST00000625245 CACNA1CQ13936 2221 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.87■□□□□ 0.45
SMN1-211ENST00000625245 ZNF860A6NHJ4 632 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 NPIPA5E9PKD4 350 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 MAN1A2O60476 641 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 HAUS5O94927 633 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 MLYCDO95822 493 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 CDC25BP30305 580 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 MAGEA6P43360 314 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 MPP1Q00013 466 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 NSDHLQ15738 373 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 SLC26A11Q86WA9 606 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 MDS2Q8NDY4 140 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 SLC13A3Q8WWT9 602 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 PEX11GQ96HA9 241 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 LURAP1Q96LR2 239 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 CCDC138Q96M89 665 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 GPR137Q96N19 417 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 LPAR4Q99677 370 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 ATG10Q9H0Y0 220 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 TRMT6Q9UJA5 497 aaKnown RBP17.87■□□□□ 0.45
SMN1-211ENST00000625245 ADAMTS6Q9UKP5 1117 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 FBXO5Q9UKT4 447 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 NPIPA1Q9UND3 350 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 NAALAD2Q9Y3Q0 740 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 PCDHGB6Q9Y5F9 930 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 MAD1L1Q9Y6D9 718 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 COMMD10Q9Y6G5 202 aa17.87■□□□□ 0.45
SMN1-211ENST00000625245 NCOA6Q14686 2063 aaPredicted RBP17.87■□□□□ 0.45
SMN1-211ENST00000625245 ZCWPW2A0A1B0GU75 182 aa17.86■□□□□ 0.45
SMN1-211ENST00000625245 LCMT2O60294 686 aaKnown RBP17.86■□□□□ 0.45
SMN1-211ENST00000625245 MLNP12872 115 aa17.86■□□□□ 0.45
SMN1-211ENST00000625245 GRK3P35626 688 aa17.86■□□□□ 0.45
SMN1-211ENST00000625245 NAE1Q13564 534 aa17.86■□□□□ 0.45
SMN1-211ENST00000625245 ABRAXAS2Q15018 415 aa17.86■□□□□ 0.45
SMN1-211ENST00000625245 KRTCAP3Q53RY4 240 aa17.86■□□□□ 0.45
SMN1-211ENST00000625245 CAPN13Q6MZZ7 669 aaPredicted RBP17.86■□□□□ 0.45
SMN1-211ENST00000625245 AGTRAPQ6RW13 159 aa17.86■□□□□ 0.45
SMN1-211ENST00000625245 MBOAT1Q6ZNC8 495 aa17.86■□□□□ 0.45
SMN1-211ENST00000625245 PDSS2Q86YH6 399 aa17.86■□□□□ 0.45
SMN1-211ENST00000625245 SPPL2CQ8IUH8 684 aa17.86■□□□□ 0.45
SMN1-211ENST00000625245 PALM2Q8IXS6 379 aa17.86■□□□□ 0.45
SMN1-211ENST00000625245 TMEM178AQ8NBL3 297 aa17.86■□□□□ 0.45
SMN1-211ENST00000625245 CALML6Q8TD86 181 aa17.86■□□□□ 0.45
SMN1-211ENST00000625245 THAP3Q8WTV1 239 aaPredicted RBP17.86■□□□□ 0.45
SMN1-211ENST00000625245 TM4SF19Q96DZ7 209 aa17.86■□□□□ 0.45
SMN1-211ENST00000625245 NPAS2Q99743 824 aa17.86■□□□□ 0.45
SMN1-211ENST00000625245 XAB2Q9HCS7 855 aaKnown RBP17.86■□□□□ 0.45
SMN1-211ENST00000625245 MMP25Q9NPA2 562 aa17.86■□□□□ 0.45
SMN1-211ENST00000625245 ITGB1BP2Q9UKP3 347 aa17.86■□□□□ 0.45
SMN1-211ENST00000625245 PDE10AQ9Y233 779 aa17.86■□□□□ 0.45
SMN1-211ENST00000625245 GABRR3A8MPY1 467 aa17.85■□□□□ 0.45
SMN1-211ENST00000625245 CDH1P12830 882 aa17.85■□□□□ 0.45
SMN1-211ENST00000625245 OR4D2P58180 307 aa17.85■□□□□ 0.45
SMN1-211ENST00000625245 TAS2R50P59544 299 aa17.85■□□□□ 0.45
SMN1-211ENST00000625245 UGT3A1Q6NUS8 523 aa17.85■□□□□ 0.45
SMN1-211ENST00000625245 GALNTL5Q7Z4T8 443 aa17.85■□□□□ 0.45
SMN1-211ENST00000625245 SLC5A8Q8N695 610 aa17.85■□□□□ 0.45
SMN1-211ENST00000625245 FAM98AQ8NCA5 519 aaKnown RBP17.85■□□□□ 0.45
SMN1-211ENST00000625245 PLPP5Q8NEB5 264 aa17.85■□□□□ 0.45
SMN1-211ENST00000625245 OR5T3Q8NGG3 340 aa17.85■□□□□ 0.45
SMN1-211ENST00000625245 ADAMTS18Q8TE60 1221 aa17.85■□□□□ 0.45
SMN1-211ENST00000625245 EEF1AKMT1Q8WVE0 214 aa17.85■□□□□ 0.45
SMN1-211ENST00000625245 TSLPQ969D9 159 aa17.85■□□□□ 0.45
SMN1-211ENST00000625245 SCMH1Q96GD3 660 aa17.85■□□□□ 0.45
SMN1-211ENST00000625245 SERPINB12Q96P63 405 aa17.85■□□□□ 0.45
SMN1-211ENST00000625245 NDNQ99608 321 aa17.85■□□□□ 0.45
SMN1-211ENST00000625245 AARSD1Q9BTE6 412 aaKnown RBP17.85■□□□□ 0.45
SMN1-211ENST00000625245 CDCP1Q9H5V8 836 aa17.85■□□□□ 0.45
SMN1-211ENST00000625245 IARS2Q9NSE4 1012 aaKnown RBP17.85■□□□□ 0.45
SMN1-211ENST00000625245 PDZD2O15018 2839 aa17.85■□□□□ 0.45
SMN1-211ENST00000625245 POLQO75417 2590 aa17.85■□□□□ 0.45
SMN1-211ENST00000625245 OTOGQ6ZRI0 2925 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms