RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 FZD9O00144 591 aa14.67□□□□□ -0.06
PMS1-221ENST00000624204 FFAR2O15552 330 aa14.67□□□□□ -0.06
PMS1-221ENST00000624204 LRRTM2O43300 516 aa14.67□□□□□ -0.06
PMS1-221ENST00000624204 TBX18O95935 607 aa14.67□□□□□ -0.06
PMS1-221ENST00000624204 ALAS2P22557 587 aa14.67□□□□□ -0.06
PMS1-221ENST00000624204 CDH12P55289 794 aa14.67□□□□□ -0.06
PMS1-221ENST00000624204 ACVR1Q04771 509 aa14.67□□□□□ -0.06
PMS1-221ENST00000624204 HNRNPA0Q13151 305 aaKnown RBP14.67□□□□□ -0.06
PMS1-221ENST00000624204 MANEALQ5VSG8 457 aa14.67□□□□□ -0.06
PMS1-221ENST00000624204 TRIQKQ629K1 86 aa14.67□□□□□ -0.06
PMS1-221ENST00000624204 KIAA1841Q6NSI8 718 aa14.67□□□□□ -0.06
PMS1-221ENST00000624204 NIPSNAP1Q9BPW8 284 aa14.67□□□□□ -0.06
PMS1-221ENST00000624204 PAAF1Q9BRP4 392 aa14.67□□□□□ -0.06
PMS1-221ENST00000624204 POLR1EQ9GZS1 481 aaKnown RBP14.67□□□□□ -0.06
PMS1-221ENST00000624204 PPIL3Q9H2H8 161 aaKnown RBP14.67□□□□□ -0.06
PMS1-221ENST00000624204 ZC4H2Q9NQZ6 224 aa14.67□□□□□ -0.06
PMS1-221ENST00000624204 RWDD3Q9Y3V2 267 aa14.67□□□□□ -0.06
PMS1-221ENST00000624204 CCL27Q9Y4X3 112 aa14.67□□□□□ -0.06
PMS1-221ENST00000624204 PCDHGB3Q9Y5G1 929 aa14.67□□□□□ -0.06
PMS1-221ENST00000624204 MCM3APO60318 1980 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 TP53P04637 393 aaPredicted RBP14.66□□□□□ -0.06
PMS1-221ENST00000624204 CTRB1P17538 263 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 TNNI3P19429 210 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 FEN1P39748 380 aaKnown RBP14.66□□□□□ -0.06
PMS1-221ENST00000624204 ADCYAP1R1P41586 468 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 ARHGAP1Q07960 439 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 TSTA3Q13630 321 aaPredicted RBP14.66□□□□□ -0.06
PMS1-221ENST00000624204 FLYWCH1Q4VC44 716 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 RNASE12Q5GAN4 147 aaKnown RBP14.66□□□□□ -0.06
PMS1-221ENST00000624204 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.66□□□□□ -0.06
PMS1-221ENST00000624204 CTRB2Q6GPI1 263 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 ATP6V1C2Q8NEY4 427 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 MRPL9Q9BYD2 267 aaKnown RBP14.66□□□□□ -0.06
PMS1-221ENST00000624204 PDGFDQ9GZP0 370 aaPredicted RBP14.66□□□□□ -0.06
PMS1-221ENST00000624204 LATS2Q9NRM7 1088 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 OSER1Q9NX31 292 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 NUDT4Q9NZJ9 180 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 KLHL21Q9UJP4 597 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 CFAP20Q9Y6A4 193 aaKnown RBP14.66□□□□□ -0.06
PMS1-221ENST00000624204 DICER1Q9UPY3 1922 aaKnown RBP14.66□□□□□ -0.06
PMS1-221ENST00000624204 ZNF236Q9UL36 1845 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 SLC28A1O00337 649 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 TPPPO94811 219 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 CLEC2LP0C7M8 214 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 ETV3P41162 512 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 WSCD2Q2TBF2 565 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 SLC39A12Q504Y0 691 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 LRRC66Q68CR7 880 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 LAMTOR1Q6IAA8 161 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 AFTPHQ6ULP2 937 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 C16orf62Q7Z3J2 963 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 C1QTNF7Q9BXJ2 289 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 GABARAPL3Q9BY60 117 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.66□□□□□ -0.06
PMS1-221ENST00000624204 CRISPLD1Q9H336 500 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 NIPAL2Q9H841 368 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 FKBPLQ9UIM3 349 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 ATP6V1G2-DDX39BF2Z307 99 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 PLA2G10O15496 165 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 PLOD3O60568 738 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 PRKACAP17612 351 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 MC4RP32245 332 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 MAP2K3P46734 347 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 INPP1P49441 399 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 MAN2A2P49641 1150 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 MAB21L1Q13394 359 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 PPIGQ13427 754 aaKnown RBP eCLIP14.66□□□□□ -0.062e-6■■□□□ 12.6
PMS1-221ENST00000624204 CDH18Q13634 790 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 LCN1P1Q5VSP4 162 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 GPR65Q8IYL9 337 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 OR4M2Q8NGB6 313 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 OR9Q2Q8NGE9 314 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 OR9Q1Q8NGQ5 310 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 RAD9AQ99638 391 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 GALNT9Q9HCQ5 603 aa14.66□□□□□ -0.06
PMS1-221ENST00000624204 NINQ8N4C6 2090 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 COL4A5P29400 1685 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 TEX51A0A1B0GUA7 166 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 WASHC1A8K0Z3 465 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 LOC730098B7Z3J9 87 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 RFXAPO00287 272 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 LIMK1P53667 647 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 SPIBQ01892 262 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 TNK1Q13470 666 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 MARCH8Q5T0T0 291 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 MFSD14CQ5VZR4 134 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 FAM171BQ6P995 826 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 XKRXQ6PP77 449 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 PTCHD4Q6ZW05 846 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 GALNT11Q8NCW6 608 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 OR6C4Q8NGE1 309 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 TBC1D20Q96BZ9 403 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 REPS1Q96D71 796 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 SPATA9Q9BWV2 254 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 ABHD16BQ9H3Z7 469 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 CLEC2DQ9UHP7 191 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 FNDC1Q4ZHG4 1894 aaPredicted RBP14.65□□□□□ -0.06
PMS1-221ENST00000624204 FPGTO14772 594 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 SUV39H1O43463 412 aa14.65□□□□□ -0.06
PMS1-221ENST00000624204 NUDT7P0C024 238 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms