RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 CITED4Q96RK1 184 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 NIPSNAP1Q9BPW8 284 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 BOCQ9BWV1 1114 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 FBXO44Q9H4M3 255 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 NMRK2Q9NPI5 230 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 SNX7Q9UNH6 387 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 POFUT2Q9Y2G5 429 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 TMEM229AB2RXF0 380 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 EPORP19235 508 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 MAPK1P28482 360 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 GRK4P32298 578 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 IFNA8P32881 189 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 PSPHP78330 225 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 DAB2P98082 770 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 SCN1BQ07699 218 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 ASAH1Q13510 395 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 ARHGEF7Q14155 803 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 ZNF648Q5T619 568 aaPredicted RBP13.62□□□□□ -0.23
LDB3-209ENST00000623056 RDH10Q8IZV5 341 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 OR52J3Q8NH60 311 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 WDR36Q8NI36 951 aaKnown RBP13.62□□□□□ -0.23
LDB3-209ENST00000623056 VANGL1Q8TAA9 524 aaPredicted RBP13.62□□□□□ -0.23
LDB3-209ENST00000623056 OPALINQ96PE5 141 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 ADGRE3Q9BY15 652 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 ELOVL6Q9H5J4 265 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 NDUFAF4Q9P032 175 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 PRSS21Q9Y6M0 314 aa13.62□□□□□ -0.23
LDB3-209ENST00000623056 PLXNA3P51805 1871 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 A0A0B4J293 547 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 OR6C70A6NIJ9 312 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 NT5C1B-RDH14C9J2C7 533 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 SCN2BO60939 215 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 SLC25A14O95258 325 aaPredicted RBP13.61□□□□□ -0.23
LDB3-209ENST00000623056 ALPPP05187 535 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 SLC10A3P09131 477 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 CTPS1P17812 591 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 DGKAP23743 735 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 MYL9P24844 172 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 MLLT3P42568 568 aaPredicted RBP13.61□□□□□ -0.23
LDB3-209ENST00000623056 WNT3P56703 355 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 SMARCB1Q12824 385 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 SLC38A6Q8IZM9 456 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 CLECL1Q8IZS7 167 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 GALNT6Q8NCL4 622 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 ZFAND1Q8TCF1 268 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 SPPL2AQ8TCT8 520 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 GTF3C2Q8WUA4 911 aaPredicted RBP13.61□□□□□ -0.23
LDB3-209ENST00000623056 RNF31Q96EP0 1072 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 CMTM7Q96FZ5 175 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 WDFY2Q96P53 400 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 MAGEH1Q9H213 219 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 TOR4AQ9NXH8 423 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 GREB1Q4ZG55 1949 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 CHD5Q8TDI0 1954 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 SLC35F4A4IF30 521 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 B4DXG7 233 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 ADAMDEC1O15204 470 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 ZNF780AO75290 641 aaPredicted RBP13.61□□□□□ -0.23
LDB3-209ENST00000623056 IGLV3-27P01718 113 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 ANXA8P13928 327 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 TNFRSF1BP20333 461 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 TGM4P49221 684 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 MRPS6P82932 125 aaKnown RBP13.61□□□□□ -0.23
LDB3-209ENST00000623056 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.61□□□□□ -0.23
LDB3-209ENST00000623056 EFR3AQ14156 821 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 UGT8Q16880 541 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 C5orf22Q49AR2 442 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 TLK2Q86UE8 772 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 SERPINA9Q86WD7 417 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 VWA5B2Q8N398 1253 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 CLDN19Q8N6F1 224 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 TP53I13Q8NBR0 393 aaPredicted RBP13.61□□□□□ -0.23
LDB3-209ENST00000623056 OR4C15Q8NGM1 316 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 UBASH3BQ8TF42 649 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 MAL2Q969L2 176 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 SUSD3Q96L08 255 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 DOHHQ9BU89 302 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 EBPLQ9BY08 206 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 PRRG3Q9BZD7 231 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 C11orf54Q9H0W9 315 aaPredicted RBP13.61□□□□□ -0.23
LDB3-209ENST00000623056 HHATLQ9HCP6 504 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 SNTG1Q9NSN8 517 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 STMN3Q9NZ72 180 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 DNMT3LQ9UJW3 386 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 SLC45A1Q9Y2W3 748 aa13.61□□□□□ -0.23
LDB3-209ENST00000623056 F5H5T6 163 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 PRAMEF12O95522 483 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 F11P03951 625 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 ZNF7P17097 686 aaPredicted RBP13.6□□□□□ -0.23
LDB3-209ENST00000623056 PRPH2P23942 346 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 OR3A3P47888 321 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 RORCP51449 518 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 KCNQ1P51787 676 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 FKBP1BP68106 108 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 ZXDBP98169 803 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 EXOC3L2Q2M3D2 409 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 METTL2BQ6P1Q9 378 aaKnown RBP13.6□□□□□ -0.23
LDB3-209ENST00000623056 TRIM48Q8IWZ4 208 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 LGI4Q8N135 537 aa13.6□□□□□ -0.23
LDB3-209ENST00000623056 ZBTB2Q8N680 514 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms