RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 MACROD1Q9BQ69 325 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 ERVK-6Q9BXR3 956 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 CD244Q9BZW8 370 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 EPB41L1Q9H4G0 881 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 C3orf18Q9UK00 162 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 LAMA4Q16363 1823 aa8.76□□□□□ -1.01
HDAC9-229ENST00000622668 NSG1A0A0A6YYJ2 146 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 LOC285095A0A1B0GVY8 99 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 MYO1CO00159 1063 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 GNB5O14775 395 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 BIRC5O15392 142 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 MOSPD3O75425 235 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 RFPL3O75679 317 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 PRLP01236 227 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 SNRPB2P08579 225 aaKnown RBP8.75□□□□□ -1.01
HDAC9-229ENST00000622668 XKP51811 444 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 MED21Q13503 144 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 C1DQ13901 141 aaKnown RBP8.75□□□□□ -1.01
HDAC9-229ENST00000622668 GPR68Q15743 365 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 TBC1D25Q3MII6 688 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 ZNF549Q6P9A3 640 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 GOLGA7Q7Z5G4 137 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 TMEM135Q86UB9 458 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 NLGN4XQ8N0W4 816 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 SH3YL1Q96HL8 342 aaPredicted RBP8.75□□□□□ -1.01
HDAC9-229ENST00000622668 PKP4Q99569 1192 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 C1QTNF2Q9BXJ5 285 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 TWSG1Q9GZX9 223 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 S1PR5Q9H228 398 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 RAB21Q9UL25 225 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 ARID1BQ8NFD5 2236 aaPredicted RBP8.75□□□□□ -1.01
HDAC9-229ENST00000622668 FAM159BA6NKW6 160 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 PLRG1O43660 514 aaKnown RBP8.75□□□□□ -1.01
HDAC9-229ENST00000622668 ALOX5P09917 674 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 XCR1P46094 333 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 KCNC1P48547 511 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 GPLD1P80108 840 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 SLAMF1Q13291 335 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 SNTA1Q13424 505 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 TAF13Q15543 124 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 DECR1Q16698 335 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 AGBL4Q5VU57 503 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 HORMAD2Q8N7B1 307 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 OR9Q1Q8NGQ5 310 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 UTP15Q8TED0 518 aaKnown RBP8.75□□□□□ -1.01
HDAC9-229ENST00000622668 SLC35G5Q96KT7 338 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 KCNC2Q96PR1 638 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 PTGES2Q9H7Z7 377 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 TMEM184CQ9NVA4 438 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 B4GALT7Q9UBV7 327 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 SH3GLB1Q9Y371 365 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 NOTCH2Q04721 2471 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 RDH16O75452 317 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 POU2F2P09086 479 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 HSD11B2P80365 405 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 DOC2AQ14183 400 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 SPDYCQ5MJ68 293 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 ADAMTSL4Q6UY14 1074 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 ACTRT2Q8TDY3 377 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 LPGAT1Q92604 370 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 LRRC46Q96FV0 321 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 DUSP26Q9BV47 211 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 SOX17Q9H6I2 414 aaPredicted RBP8.75□□□□□ -1.01
HDAC9-229ENST00000622668 TMEM27Q9HBJ8 222 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 ZNF304Q9HCX3 659 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 LOXL2Q9Y4K0 774 aa8.75□□□□□ -1.01
HDAC9-229ENST00000622668 COL11A1P12107 1806 aaPredicted RBP8.75□□□□□ -1.01
HDAC9-229ENST00000622668 K7EQS6 105 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 VILLO15195 856 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 AP1G1O43747 822 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 PDE9AO76083 593 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 P04436 131 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 PRDX3P30048 256 aaKnown RBP8.74□□□□□ -1.01
HDAC9-229ENST00000622668 CCR7P32248 378 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 GABREP78334 506 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 ERV3-1Q14264 604 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 ABRAXAS2Q15018 415 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 FAM174BQ3ZCQ3 159 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 ZNF789Q5FWF6 425 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 STPG1Q5TH74 334 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 KLHL24Q6TFL4 600 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 UBQLNLQ8IYU4 475 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 CCDC116Q8IYX3 515 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 DDHD1Q8NEL9 900 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 DIO2Q92813 273 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 SLCO2A1Q92959 643 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 RNF145Q96MT1 663 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 SYT11Q9BT88 431 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 TBC1D29Q9UFV1 150 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 HAO1Q9UJM8 370 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 A8MVJ9 347 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 ACOT7O00154 380 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 TOR1BO14657 336 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 IMPDH1P20839 514 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 PPIBP23284 216 aaKnown RBP8.74□□□□□ -1.01
HDAC9-229ENST00000622668 PSMB5P28074 263 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 KCNC3Q14003 757 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 PIP5KL1Q5T9C9 394 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 RNF111Q6ZNA4 994 aa8.74□□□□□ -1.01
HDAC9-229ENST00000622668 LINC00696Q6ZRV3 163 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms