RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 TPMTP51580 245 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 KIAA1024LP59773 190 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 KRT33BQ14525 404 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 ATP6AP1Q15904 470 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 ANXA8L1Q5VT79 327 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 TRIM69Q86WT6 500 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 C10orf111Q8N326 155 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 DENND6BQ8NEG7 585 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 CXorf40BQ96DE9 158 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 MVB12BQ9H7P6 319 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 ATP6V1HQ9UI12 483 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 BTNL2Q9UIR0 455 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 EXO1Q9UQ84 846 aaKnown RBP18.28■□□□□ 0.52
PSPC1-206ENST00000619300 COL4A2P08572 1712 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 PCM1Q15154 2024 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 PRSS38A1L453 326 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 SHISA7A6NL88 538 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 CLIC1O00299 241 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 CPSF4O95639 269 aaKnown RBP18.28■□□□□ 0.52
PSPC1-206ENST00000619300 GBAP04062 536 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 PSMB5P28074 263 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 RAB28P51157 221 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 CCINQ13939 588 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 FAM98BQ52LJ0 330 aaKnown RBP18.28■□□□□ 0.52
PSPC1-206ENST00000619300 C6orf52Q5T4I8 152 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 INTS11Q5TA45 600 aaKnown RBP18.28■□□□□ 0.52
PSPC1-206ENST00000619300 CLECL1Q8IZS7 167 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 OR4K1Q8NGD4 311 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 SNX19Q92543 992 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 REXO5Q96IC2 774 aaKnown RBP18.28■□□□□ 0.52
PSPC1-206ENST00000619300 REEP4Q9H6H4 257 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 CARS2Q9HA77 564 aaKnown RBP18.28■□□□□ 0.52
PSPC1-206ENST00000619300 PRDM8Q9NQV8 689 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 SH3BP4Q9P0V3 963 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 DLGAP2Q9P1A6 1054 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 CROCCQ5TZA2 2017 aa18.28■□□□□ 0.52
PSPC1-206ENST00000619300 TCRBV21S2A2A0A5A6 115 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 A6NHS1 94 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 ANKDD1BA6NHY2 528 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 SAC3D1A6NKF1 404 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 PDZK1P1A8MUH7 402 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 H7BY64 318 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 KLHL18O94889 574 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 KLK1P06870 262 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 ENGP17813 658 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 PACRGLQ8N7B6 248 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 C16orf78Q8WTQ4 265 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 FAM3CQ92520 227 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 FAM162AQ96A26 154 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 PRAP1Q96NZ9 151 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 OR2M4Q96R27 311 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 UGT2B28Q9BY64 529 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 PITHD1Q9GZP4 211 aaPredicted RBP18.27■□□□□ 0.52
PSPC1-206ENST00000619300 NT5DC2Q9H857 520 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 AHSPQ9NZD4 102 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 MMP17Q9ULZ9 603 aa18.27■□□□□ 0.52
PSPC1-206ENST00000619300 LRRC72A6NJI9 287 aa18.27■□□□□ 0.51
PSPC1-206ENST00000619300 OR52A4PA6NMU1 304 aa18.27■□□□□ 0.51
PSPC1-206ENST00000619300 SOCS2O14508 198 aa18.27■□□□□ 0.51
PSPC1-206ENST00000619300 CREG1O75629 220 aa18.27■□□□□ 0.51
PSPC1-206ENST00000619300 SMNDC1O75940 238 aaKnown RBP eCLIP18.27■□□□□ 0.51
PSPC1-206ENST00000619300 EPN2O95208 641 aa18.27■□□□□ 0.51
PSPC1-206ENST00000619300 LDLRP01130 860 aa18.27■□□□□ 0.51
PSPC1-206ENST00000619300 ASGR2P07307 311 aa18.27■□□□□ 0.51
PSPC1-206ENST00000619300 RAP2AP10114 183 aa18.27■□□□□ 0.51
PSPC1-206ENST00000619300 CHRNB3Q05901 458 aa18.27■□□□□ 0.51
PSPC1-206ENST00000619300 COL13A1Q5TAT6 717 aaPredicted RBP18.27■□□□□ 0.51
PSPC1-206ENST00000619300 ENPP7Q6UWV6 458 aa18.27■□□□□ 0.51
PSPC1-206ENST00000619300 ZNF551Q7Z340 670 aaPredicted RBP18.27■□□□□ 0.51
PSPC1-206ENST00000619300 SERPINA11Q86U17 422 aa18.27■□□□□ 0.51
PSPC1-206ENST00000619300 ANKRD53Q8N9V6 530 aa18.27■□□□□ 0.51
PSPC1-206ENST00000619300 PHF12Q96QT6 1004 aa18.27■□□□□ 0.51
PSPC1-206ENST00000619300 C9orf16Q9BUW7 83 aa18.27■□□□□ 0.51
PSPC1-206ENST00000619300 RAB11FIP5Q9BXF6 653 aa18.27■□□□□ 0.51
PSPC1-206ENST00000619300 XKR8Q9H6D3 395 aa18.27■□□□□ 0.51
PSPC1-206ENST00000619300 PCDHB11Q9Y5F2 797 aa18.27■□□□□ 0.51
PSPC1-206ENST00000619300 SCAMP1O15126 338 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 NARSO43776 548 aaKnown RBP18.26■□□□□ 0.51
PSPC1-206ENST00000619300 RETP07949 1114 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 ZCCHC18P0CG32 403 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 GPX2P18283 190 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 GABRG2P18507 467 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 PKLRP30613 574 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 SERPINB1P30740 379 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 REEP5Q00765 189 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 PRDX1Q06830 199 aaKnown RBP18.26■□□□□ 0.51
PSPC1-206ENST00000619300 LRRC74AQ0VAA2 488 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 SLC14A1Q13336 389 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 NFATC4Q14934 902 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 RPE65Q16518 533 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 DEPDC1Q5TB30 811 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 UGT2A3Q6UWM9 527 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 R3HCC1LQ7Z5L2 792 aaKnown RBP18.26■□□□□ 0.51
PSPC1-206ENST00000619300 SLC9B2Q86UD5 537 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 CBR4Q8N4T8 237 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 OR2L8Q8NGY9 312 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 BMFQ96LC9 184 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 OSBPL11Q9BXB4 747 aa18.26■□□□□ 0.51
PSPC1-206ENST00000619300 BHLHE41Q9C0J9 482 aaPredicted RBP18.26■□□□□ 0.51
PSPC1-206ENST00000619300 MYNNQ9NPC7 610 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms