RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 LAX1Q8IWV1 398 aa10.46□□□□□ -0.73
UPF3A-212ENST00000619079 LIX1Q8N485 282 aa10.46□□□□□ -0.73
UPF3A-212ENST00000619079 OR4F6Q8NGB9 312 aa10.46□□□□□ -0.73
UPF3A-212ENST00000619079 RNF31Q96EP0 1072 aa10.46□□□□□ -0.73
UPF3A-212ENST00000619079 ZC3HAV1LQ96H79 300 aaKnown RBP10.46□□□□□ -0.73
UPF3A-212ENST00000619079 GPR21Q99679 349 aa10.46□□□□□ -0.73
UPF3A-212ENST00000619079 TAPBPLQ9BX59 468 aa10.46□□□□□ -0.73
UPF3A-212ENST00000619079 AMBNQ9NP70 447 aa10.46□□□□□ -0.73
UPF3A-212ENST00000619079 AASDHPPTQ9NRN7 309 aa10.46□□□□□ -0.73
UPF3A-212ENST00000619079 IMPAD1Q9NX62 359 aa10.46□□□□□ -0.73
UPF3A-212ENST00000619079 SEC14L4Q9UDX3 406 aa10.46□□□□□ -0.73
UPF3A-212ENST00000619079 KCTD3Q9Y597 815 aa10.46□□□□□ -0.73
UPF3A-212ENST00000619079 PCDHGB3Q9Y5G1 929 aa10.46□□□□□ -0.73
UPF3A-212ENST00000619079 LAMA2P24043 3122 aaKnown RBP10.46□□□□□ -0.73
UPF3A-212ENST00000619079 SH3D21A4FU49 640 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 GPR182O15218 404 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 NDUFS3O75489 264 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 EPN2O95208 641 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 ESR1P03372 595 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 CHMP24386 653 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 RANBP2P49792 3224 aaKnown RBP10.46□□□□□ -0.74
UPF3A-212ENST00000619079 CYP4F2P78329 520 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 POU6F2P78424 691 aaPredicted RBP10.46□□□□□ -0.74
UPF3A-212ENST00000619079 PPIGQ13427 754 aaKnown RBP eCLIP10.46□□□□□ -0.74
UPF3A-212ENST00000619079 DMC1Q14565 340 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 MBTPS1Q14703 1052 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 SETMARQ53H47 684 aaPredicted RBP10.46□□□□□ -0.74
UPF3A-212ENST00000619079 EIF3MQ7L2H7 374 aaKnown RBP10.46□□□□□ -0.74
UPF3A-212ENST00000619079 PGBD5Q8N414 524 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 BRSK1Q8TDC3 778 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 NUDT8Q8WV74 236 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 SMOQ99835 787 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 ZSCAN5AQ9BUG6 496 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 PRRG3Q9BZD7 231 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 TRIM45Q9H8W5 580 aaPredicted RBP10.46□□□□□ -0.74
UPF3A-212ENST00000619079 AGO3Q9H9G7 860 aaKnown RBP10.46□□□□□ -0.74
UPF3A-212ENST00000619079 UXTQ9UBK9 157 aaPredicted RBP10.46□□□□□ -0.74
UPF3A-212ENST00000619079 PADI3Q9ULW8 664 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 ST3GAL5Q9UNP4 418 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 PIN4Q9Y237 131 aaKnown RBP10.46□□□□□ -0.74
UPF3A-212ENST00000619079 CCL27Q9Y4X3 112 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 AP1M2Q9Y6Q5 423 aa10.46□□□□□ -0.74
UPF3A-212ENST00000619079 SMIM28A0A1B0GU29 152 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 FABP12A6NFH5 140 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 HCN1O60741 890 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 GPX5O75715 221 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 LGI1O95970 557 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 PEX11BO96011 259 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 MMP2P08253 660 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 CSF3P09919 207 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 S100A3P33764 101 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 RPS19P39019 145 aaKnown RBP10.45□□□□□ -0.74
UPF3A-212ENST00000619079 IDH2P48735 452 aaKnown RBP10.45□□□□□ -0.74
UPF3A-212ENST00000619079 LILRA4P59901 499 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 DSC2Q02487 901 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 ABRQ12979 859 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 GTF2H2Q13888 395 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 FAM214AQ32MH5 1076 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 NDUFAF5Q5TEU4 345 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 PXDC1Q5TGL8 231 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 SAXO2Q658L1 398 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 GTF2H2CQ6P1K8 395 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 NOTUMQ6P988 496 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 BHLHA9Q7RTU4 235 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 GPRIN1Q7Z2K8 1008 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 GOLGA7Q7Z5G4 137 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 KIF18BQ86Y91 864 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 C1orf52Q8N6N3 182 aaKnown RBP10.45□□□□□ -0.74
UPF3A-212ENST00000619079 GALNT11Q8NCW6 608 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 DBF4BQ8NFT6 615 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 TADA1Q96BN2 335 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 CCDC120Q96HB5 630 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 HSH2DQ96JZ2 352 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 KCNC2Q96PR1 638 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 HBEGFQ99075 208 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 SPATA9Q9BWV2 254 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 HDHD5Q9BXW7 423 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 SYNDIG1Q9H7V2 258 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 EXOSC4Q9NPD3 245 aaKnown RBP10.45□□□□□ -0.74
UPF3A-212ENST00000619079 SIRT5Q9NXA8 310 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 ENOPH1Q9UHY7 261 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 STUB1Q9UNE7 303 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 POFUT2Q9Y2G5 429 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 MED16Q9Y2X0 877 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 WASH4PA8MWX3 477 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 ZNF670-ZNF695F2Z2N8 137 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 TRIM77I1YAP6 450 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 AKR7A2O43488 359 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 MPZL2O60487 215 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 PAGE1O75459 146 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 SLC22A5O76082 557 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 DIRAS1O95057 198 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 IGLV3-25P01717 112 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 SCG5P05408 212 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 PSMA1P25786 263 aaKnown RBP10.45□□□□□ -0.74
UPF3A-212ENST00000619079 KDELR2P33947 212 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 KIR2DL3P43628 341 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 HK3P52790 923 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 NUDT6P53370 316 aa10.45□□□□□ -0.74
UPF3A-212ENST00000619079 EIF2B5Q13144 721 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms