RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 CNR1P21554 472 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 JAK1P23458 1154 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 TACR1P25103 407 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 PPARGP37231 505 aaPredicted RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 ITGA8P53708 1063 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 PRKG2Q13237 762 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 CAPRIN1Q14444 709 aaKnown RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 RPS6KA1Q15418 735 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 AARS2Q5JTZ9 985 aaKnown RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 WLSQ5T9L3 541 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 PAPD4Q6PIY7 484 aaKnown RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 SHISA6Q6ZSJ9 500 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 OTOAQ7RTW8 1153 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 OR4N4Q8N0Y3 316 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 OR2M7Q8NG81 312 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 MBD3L2Q8NHZ7 208 aaPredicted RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 PPP1R14CQ8TAE6 165 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 SMPDL3AQ92484 453 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 CAVIN3Q969G5 261 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 RERGQ96A58 199 aaPredicted RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 MARK4Q96L34 752 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 TBL1YQ9BQ87 522 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 AARSD1Q9BTE6 412 aaKnown RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 AMBRA1Q9C0C7 1298 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 P2RY12Q9H244 342 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 ALG2Q9H553 416 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 FAM114A2Q9NRY5 505 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 PNPLA3Q9NST1 481 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 RSPH14Q9UHP6 348 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.27□□□□□ -1.73
SNCA-213ENST00000618500 NPFFR2Q9Y5X5 522 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 IGKV1-8A0A0C4DH67 115 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 INAFM1C9JVW0 142 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 WIPF1O43516 503 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 PSIP1O75475 530 aaKnown RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 SEC24DO94855 1032 aaPredicted RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 SLC4A1P02730 911 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 APOA4P06727 396 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 TMEM253P0C7T8 217 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 ADH7P40394 386 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 BCL6P41182 706 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 CDKN2BP42772 138 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 CHRNA4P43681 627 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 COPS2P61201 443 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 UBXN1Q04323 297 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 KLHL30Q0D2K2 578 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 FOXO1Q12778 655 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 NOMO1Q15155 1222 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 SF1Q15637 639 aaKnown RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 SFT2D3Q587I9 215 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 NSUN5P2Q63ZY6 315 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 KIAA0930Q6ICG6 404 aaPredicted RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 TTC23LQ6PF05 361 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 DNAJC14Q6Y2X3 702 aaPredicted RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 RTL4Q6ZR62 310 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 GK5Q6ZS86 529 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 YTHDF3Q7Z739 585 aaKnown RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 CCDC71Q8IV32 467 aaPredicted RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 SLC15A4Q8N697 577 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 OR5M3Q8NGP4 307 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 RAPGEF5Q92565 580 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 MMABQ96EY8 250 aaPredicted RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 FERMT1Q9BQL6 677 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 CDCP1Q9H5V8 836 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 TMEM184CQ9NVA4 438 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 MYO1AQ9UBC5 1043 aa4.27□□□□□ -1.73
SNCA-213ENST00000618500 YARS2Q9Y2Z4 477 aaKnown RBP4.27□□□□□ -1.73
SNCA-213ENST00000618500 H3BMM5 538 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 H7C1Q1 480 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 UQCRHP07919 91 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 H2AFZP0C0S5 128 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 CHRM3P20309 590 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 CCR7P32248 378 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 MYL5Q02045 173 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 PRDX1Q06830 199 aaKnown RBP4.26□□□□□ -1.73
SNCA-213ENST00000618500 ACKR1Q16570 336 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 BLOC1S3Q6QNY0 202 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 SCIMPQ6UWF3 145 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 THSD4Q6ZMP0 1018 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 DNM1P46Q6ZS02 220 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 H2AFVQ71UI9 128 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 CREBRFQ8IUR6 639 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 CDKL3Q8IVW4 592 aaPredicted RBP4.26□□□□□ -1.73
SNCA-213ENST00000618500 LRRC56Q8IYG6 542 aaPredicted RBP4.26□□□□□ -1.73
SNCA-213ENST00000618500 PM20D2Q8IYS1 436 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 OR51Q1Q8NH59 317 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 HSPBAP1Q96EW2 488 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 CDKN2AIPNLQ96HQ2 116 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 PANX3Q96QZ0 392 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 SMC6Q96SB8 1091 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 NRTNQ99748 197 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 MAK16Q9BXY0 300 aaKnown RBP4.26□□□□□ -1.73
SNCA-213ENST00000618500 TTTY12Q9BZ98 90 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 PCBD2Q9H0N5 130 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 HSD3B7Q9H2F3 369 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 KLHL1Q9NR64 748 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 CHMP5Q9NZZ3 219 aa4.26□□□□□ -1.73
SNCA-213ENST00000618500 KLHL8Q9P2G9 620 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms