RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 SERPIND1P05546 499 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 C1GALT1C1LP0DN25 315 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 ACP5P13686 325 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 PRPH2P23942 346 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 GZMMP51124 257 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 CLCNKAP51800 687 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 MAPK10P53779 464 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 SRSF11Q05519 484 aaKnown RBP11.94□□□□□ -0.5
CIITA-212ENST00000618207 ABHD18Q0P651 414 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.94□□□□□ -0.5
CIITA-212ENST00000618207 IRAK1BP1Q5VVH5 260 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 PNCKQ6P2M8 343 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 GPR149Q86SP6 731 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 FAM124AQ86V42 546 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 GALNT15Q8N3T1 639 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 CPA6Q8N4T0 437 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 SLC5A11Q8WWX8 675 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 DGCR14Q96DF8 476 aaKnown RBP11.94□□□□□ -0.5
CIITA-212ENST00000618207 MPP4Q96JB8 637 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 CCDC115Q96NT0 180 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 BARD1Q99728 777 aaKnown RBP11.94□□□□□ -0.5
CIITA-212ENST00000618207 ING2Q9H160 280 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 ADNPQ9H2P0 1102 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 TOR3AQ9H497 397 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 CUEDC1Q9NWM3 386 aaPredicted RBP11.94□□□□□ -0.5
CIITA-212ENST00000618207 KCNK6Q9Y257 313 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 PLEKHM1Q9Y4G2 1056 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 SNRNP200O75643 2136 aaKnown RBP11.94□□□□□ -0.5
CIITA-212ENST00000618207 ATG2AQ2TAZ0 1938 aa11.94□□□□□ -0.5
CIITA-212ENST00000618207 FAM220BPB1ANY3 271 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 SCAMP2O15127 329 aaKnown RBP11.93□□□□□ -0.5
CIITA-212ENST00000618207 CYP4B1P13584 511 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 MYF6P23409 242 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 CDK3Q00526 305 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 GAB1Q13480 694 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 CAMK2GQ13555 558 aaPredicted RBP11.93□□□□□ -0.5
CIITA-212ENST00000618207 DAG1Q14118 895 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 MYBPC3Q14896 1274 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 CST6Q15828 149 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 CYP27C1Q4G0S4 372 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 BCL7AQ4VC05 210 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 ADCK2Q7Z695 626 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 ZDHHC21Q8IVQ6 265 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 FAM9CQ8IZT9 166 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 OR2L2Q8NH16 312 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 HM13Q8TCT9 377 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 XKR8Q9H6D3 395 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 VNN3Q9NY84 501 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 THAP10Q9P2Z0 257 aaPredicted RBP11.93□□□□□ -0.5
CIITA-212ENST00000618207 PNMA8BQ9ULN7 279 aaPredicted RBP11.93□□□□□ -0.5
CIITA-212ENST00000618207 FZD4Q9ULV1 537 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 ABCG2Q9UNQ0 655 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 PRAMEF33A0A0G2JMD5 474 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 SMIM31A0A1B0GVY4 71 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 THRBP10828 461 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 TIA1P31483 386 aaKnown RBP eCLIP11.93□□□□□ -0.5
CIITA-212ENST00000618207 SHMT2P34897 504 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 PIGAP37287 484 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 CRATP43155 626 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 TRPC1P48995 793 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 TAS2R50P59544 299 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 C2orf80Q0P641 193 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 ZNF658BQ4V348 819 aaPredicted RBP11.93□□□□□ -0.5
CIITA-212ENST00000618207 PRAMEF14Q5SWL7 426 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 PRAMEF13Q5VWM6 474 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 KIAA1211LQ6NV74 962 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 CALHM3Q86XJ0 350 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 OR4A15Q8NGL6 344 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 OR14C36Q8NHC7 312 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 SGCDQ92629 289 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 REXO5Q96IC2 774 aaKnown RBP11.93□□□□□ -0.5
CIITA-212ENST00000618207 C5AR2Q9P296 337 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 DNAJB9Q9UBS3 223 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 AASSQ9UDR5 926 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 HEMK1Q9Y5R4 338 aaPredicted RBP11.93□□□□□ -0.5
CIITA-212ENST00000618207 SCN3AQ9NY46 2000 aa11.93□□□□□ -0.5
CIITA-212ENST00000618207 H7BY64 318 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 MITFO75030 526 aaPredicted RBP11.92□□□□□ -0.5
CIITA-212ENST00000618207 KCNK5O95279 499 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 ALPLP05186 524 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 IL7RP16871 459 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 TNFRSF1BP20333 461 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 IDSP22304 550 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 ACADLP28330 430 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 PCSK6P29122 969 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 ALDH3A2P51648 485 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 NEDD8Q15843 81 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 HIST2H2ACQ16777 129 aaPredicted RBP11.92□□□□□ -0.5
CIITA-212ENST00000618207 TMEM259Q4ZIN3 620 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 HIST2H2AA3Q6FI13 130 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 SYCE2Q6PIF2 218 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 CHTF18Q8WVB6 975 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 PYURFQ96I23 114 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 PRAP1Q96NZ9 151 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 HAUS8Q9BT25 410 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 MKRN2Q9H000 416 aaKnown RBP11.92□□□□□ -0.5
CIITA-212ENST00000618207 OR52A5Q9H2C5 316 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 TRPV5Q9NQA5 729 aa11.92□□□□□ -0.5
CIITA-212ENST00000618207 IMP3Q9NV31 184 aaKnown RBP11.92□□□□□ -0.5
CIITA-212ENST00000618207 GDE1Q9NZC3 331 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms