RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 DLGAP1O14490 977 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 SLC31A1O15431 190 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 HPRP00739 348 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 NRIP1P48552 1158 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 ANKRD26P1Q6NSI1 321 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 RPL10LQ96L21 214 aaKnown RBP16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 CD180Q99467 661 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 TBX5Q99593 518 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 SLC16A5O15375 505 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 SOX30O94993 753 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 ZNF45Q02386 682 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 SH3D19Q5HYK7 790 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 PLEKHS1Q5SXH7 462 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 DCAF12L1Q5VU92 463 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 CELF5Q8N6W0 485 aaKnown RBP16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 ENDOVQ8N8Q3 282 aaKnown RBP16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 C2CD4AQ8NCU7 369 aaPredicted RBP16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 GNPDA2Q8TDQ7 276 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 ASPNQ9BXN1 380 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 UTS2RQ9UKP6 389 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 SPEF2Q9C093 1822 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 PRSS51A0A1B0GVH4 220 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 BHMG1C9JSJ3 638 aaPredicted RBP16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 ERI3O43414 337 aaKnown RBP16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 INCA1Q0VD86 236 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 DECR1Q16698 335 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 C6orf183Q5T699 404 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 DCAF4L2Q8NA75 395 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 OR4F6Q8NGB9 312 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 NLE1Q9NVX2 485 aaPredicted RBP16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 ZDHHC2Q9UIJ5 367 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 HCN4Q9Y3Q4 1203 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 M0R036 132 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 TNFRSF10BO14763 440 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 OR7A10O76100 309 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 ADH5P11766 374 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 ENDOUP21128 410 aaKnown RBP16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 LCN1P31025 176 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 HMGCS1Q01581 520 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 SH3PXD2AQ5TCZ1 1133 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 LYSMD3Q7Z3D4 306 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 CEP97Q8IW35 865 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 SLC5A11Q8WWX8 675 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 SLC2A11Q9BYW1 496 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 CDH10Q9Y6N8 788 aa16.9■□□□□ 0.3
HMGXB3-206ENST00000613459 VSTM5A8MXK1 200 aa16.89■□□□□ 0.3
HMGXB3-206ENST00000613459 ANKRD66B4E2M5 251 aa16.89■□□□□ 0.3
HMGXB3-206ENST00000613459 DISC1C4P0D8 188 aa16.89■□□□□ 0.3
HMGXB3-206ENST00000613459 CHRM5P08912 532 aaPredicted RBP16.89■□□□□ 0.3
HMGXB3-206ENST00000613459 PROZP22891 400 aa16.89■□□□□ 0.3
HMGXB3-206ENST00000613459 MLLT3P42568 568 aaPredicted RBP16.89■□□□□ 0.3
HMGXB3-206ENST00000613459 SNTA1Q13424 505 aa16.89■□□□□ 0.3
HMGXB3-206ENST00000613459 TMEM198Q66K66 360 aa16.89■□□□□ 0.3
HMGXB3-206ENST00000613459 OR8J3Q8NGG0 315 aa16.89■□□□□ 0.3
HMGXB3-206ENST00000613459 SCAMP5Q8TAC9 235 aa16.89■□□□□ 0.3
HMGXB3-206ENST00000613459 KCNJ9Q92806 393 aa16.89■□□□□ 0.3
HMGXB3-206ENST00000613459 PCDHGA2Q9Y5H1 932 aa16.89■□□□□ 0.3
HMGXB3-206ENST00000613459 HS3ST4Q9Y661 456 aa16.89■□□□□ 0.3
HMGXB3-206ENST00000613459 BCHEP06276 602 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 NPR2P20594 1047 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 TMBIM6P55061 237 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 NPY5RQ15761 445 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 ARSIQ5FYB1 569 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 GID4Q8IVV7 300 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 CENPSQ8N2Z9 138 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 BBS10Q8TAM1 723 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 BPIFB1Q8TDL5 484 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 HDAC2Q92769 488 aaKnown RBP16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 BIRC7Q96CA5 298 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 CARS2Q9HA77 564 aaKnown RBP16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 CDRT1O95170 752 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 BAIAP2L2Q6UXY1 529 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 GOLM1Q8NBJ4 401 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 HSH2DQ96JZ2 352 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 FUZQ9BT04 418 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 MAB21L2Q9Y586 359 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 NPIPA5E9PKD4 350 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 NRP1O14786 923 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 TGFB1P01137 390 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 AHSGP02765 367 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 HRH2P25021 359 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 KCNC4Q03721 635 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 MPP2Q14168 576 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 ZNF181Q2M3W8 571 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 C12orf40Q86WS4 652 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 DCUN1D3Q8IWE4 304 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 YIPF7Q8N8F6 280 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 FAM110BQ8TC76 370 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 JSRP1Q96MG2 331 aaPredicted RBP16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 ALPK1Q96QP1 1244 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 TMEM168Q9H0V1 697 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 RNF121Q9H920 327 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 TPT1P8Q9HAU6 139 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 NPIPA1Q9UND3 350 aa16.89■□□□□ 0.29
HMGXB3-206ENST00000613459 NEMP2A6NFY4 417 aa16.88■□□□□ 0.29
HMGXB3-206ENST00000613459 KLK1P06870 262 aa16.88■□□□□ 0.29
HMGXB3-206ENST00000613459 CDH11P55287 796 aa16.88■□□□□ 0.29
HMGXB3-206ENST00000613459 CDH15P55291 814 aa16.88■□□□□ 0.29
HMGXB3-206ENST00000613459 GPX6P59796 221 aa16.88■□□□□ 0.29
HMGXB3-206ENST00000613459 RPL13AP3Q6NVV1 102 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms