RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 C11orf74Q86VG3 221 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 BPIFB1Q8TDL5 484 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 UBTD2Q8WUN7 234 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 PROX1Q92786 737 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 NTMT1Q9BV86 223 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 REXO4Q9GZR2 422 aaKnown RBP15.92■□□□□ 0.14
CNOT3-208ENST00000613073 GIMAP4Q9NUV9 329 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 FBXO10Q9UK96 956 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 SLC22A14Q9Y267 594 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 RWDD3Q9Y3V2 267 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 PABPN1LA6NDY0 278 aaKnown RBP15.92■□□□□ 0.14
CNOT3-208ENST00000613073 C5orf67F2Z3F1 127 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 MANBAO00462 879 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 CRYZL1O95825 349 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 CTSCP53634 463 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 COQ5Q5HYK3 327 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 SIGIRRQ6IA17 410 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 TSPEARQ8WU66 669 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 PPP3R2Q96LZ3 170 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 DEPDC7Q96QD5 511 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 TMEM246Q9BRR3 403 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 TTYH2Q9BSA4 534 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 CARS2Q9HA77 564 aaKnown RBP15.92■□□□□ 0.14
CNOT3-208ENST00000613073 FAM172BPA6NC97 362 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 KMOO15229 486 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 TSPAN6O43657 245 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 FTH1P02794 183 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 PBLDP30039 288 aaPredicted RBP15.92■□□□□ 0.14
CNOT3-208ENST00000613073 PREPP48147 710 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 GPM6BQ13491 265 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 ZNF284Q2VY69 593 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 FAM78AQ5JUQ0 283 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 ATAD3CQ5T2N8 411 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 ZCCHC8Q6NZY4 707 aaKnown RBP15.92■□□□□ 0.14
CNOT3-208ENST00000613073 NEK5Q6P3R8 708 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 LYPD8Q6UX82 237 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 GALNT5Q7Z7M9 940 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 IQCF2Q8IXL9 164 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 AP2M1Q96CW1 435 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 LGALS12Q96DT0 336 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 ZHX1-C8orf76Q96EF9 292 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 IRF2BPLQ9H1B7 796 aa15.92■□□□□ 0.14
CNOT3-208ENST00000613073 ZBTB20Q9HC78 741 aaPredicted RBP15.92■□□□□ 0.14
CNOT3-208ENST00000613073 PDZK1P1A8MUH7 402 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 ANKRD28O15084 1053 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 ADH1CP00326 375 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 PDYNP01213 254 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 C8GP07360 202 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 DBTP11182 482 aaKnown RBP15.91■□□□□ 0.14
CNOT3-208ENST00000613073 MRPL19P49406 292 aaKnown RBP15.91■□□□□ 0.14
CNOT3-208ENST00000613073 LAPTM4AQ15012 233 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 LIPIQ6XZB0 460 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 UBE2Q1Q7Z7E8 422 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 NLGN4XQ8N0W4 816 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 LIX1Q8N485 282 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 TRAM1L1Q8N609 369 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 KRTCAP2Q8N6L1 136 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 GOLM1Q8NBJ4 401 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 PAPD5Q8NDF8 572 aaKnown RBP15.91■□□□□ 0.14
CNOT3-208ENST00000613073 PHF10Q8WUB8 498 aaKnown RBP15.91■□□□□ 0.14
CNOT3-208ENST00000613073 CITED4Q96RK1 184 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 TRPS1Q9UHF7 1281 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 CENPBD1B2RD01 187 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 GNPDA1P46926 289 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 EPS8Q12929 822 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 SELPLGQ14242 412 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 GBX1Q14549 363 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 SYT16Q17RD7 645 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 FNDC3BQ53EP0 1204 aaKnown RBP15.91■□□□□ 0.14
CNOT3-208ENST00000613073 METTL4Q8N3J2 472 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 RNF175Q8N4F7 328 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 DTWD1Q8N5C7 304 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 RASGEF1AQ8N9B8 481 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 ZNF300Q96RE9 604 aaPredicted RBP15.91■□□□□ 0.14
CNOT3-208ENST00000613073 ZSCAN5AQ9BUG6 496 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 OR2B2Q9GZK3 357 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 LRTM1Q9HBL6 345 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 KLHL42Q9P2K6 505 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 EIF3LQ9Y262 564 aaKnown RBP15.91■□□□□ 0.14
CNOT3-208ENST00000613073 PCM1Q15154 2024 aa15.91■□□□□ 0.14
CNOT3-208ENST00000613073 LOC100130705A0A1B0GUX0 176 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 SCO2O43819 266 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 ANGPTL1O95841 491 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 ABCB1P08183 1280 aaPredicted RBP15.9■□□□□ 0.14
CNOT3-208ENST00000613073 UMPSP11172 480 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 MMP12P39900 470 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 NRIP1P48552 1158 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 CHRNB3Q05901 458 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 FOXM1Q08050 763 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 NPTX1Q15818 432 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 PLEKHS1Q5SXH7 462 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 C9orf50Q5SZB4 431 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 ERAP2Q6P179 960 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 ENPP6Q6UWR7 440 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 DPPA4Q7L190 304 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 GDPD3Q7L5L3 318 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 TECPR1Q7Z6L1 1165 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 RIMKLAQ8IXN7 391 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 BTN2A2Q8WVV5 523 aa15.9■□□□□ 0.14
CNOT3-208ENST00000613073 ASZ1Q8WWH4 475 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms