RNA–Protein interactions for RNA: ENST00000612341.4

SMTN-222, Transcript of smoothelin, human

APPRIS ALT2 TSL 2 BASIC

Gene SMTN, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-222	ENST00000612341	TTC29	Q8NA56	475 aa	Predicted RBP	12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	ZNF540	Q8NDQ6	660 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	OR7G3	Q8NG95	312 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	RAB2B	Q8WUD1	216 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	TUBA1C	Q9BQE3	449 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	ACAT2	Q9BWD1	397 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	RAD21L1	Q9H4I0	556 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	ACSL6	Q9UKU0	697 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	SH3PXD2B	A1X283	911 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	NOTO	A8MTQ0	251 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	BCAS1	O75363	584 aa	Predicted RBP	12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	CAT	P04040	527 aa	Known RBP	12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	HLA-E	P13747	358 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	IMPA1	P29218	277 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	CLK3	P49761	638 aa	Known RBP	12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	VEGFB	P49765	207 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	TMBIM6	P55061	237 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	ITGAD	Q13349	1161 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	GAB1	Q13480	694 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	NPTX1	Q15818	432 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	ZNF852	Q6ZMS4	543 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	B3GNT8	Q7Z7M8	397 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	SNX29P2	Q8IUI4	249 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	NAGS	Q8N159	534 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	TERB1	Q8NA31	727 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	OR5AK3P	Q8NH89	298 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	PLEKHA8	Q96JA3	519 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	KRT84	Q9NSB2	600 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	TRNAU1AP	Q9NX07	287 aa	Known RBP	12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	RUVBL1	Q9Y265	456 aa	Known RBP	12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	AP3M1	Q9Y2T2	418 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	TESMIN	Q9Y4I5	508 aa		12.44	□□□□□ -0.42
SMTN-222	ENST00000612341	ABHD14A-ACY1	A0A1B0GW23	586 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341		K7ESM1	405 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	HOXB9	P17482	250 aa	Predicted RBP	12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	DDX5	P17844	614 aa	Known RBP	12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	GP2	P55259	537 aa	Known RBP	12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	MESP2	Q0VG99	397 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	GTF2IRD2B	Q6EKJ0	949 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	GPR153	Q6NV75	609 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	GTF2IRD2	Q86UP8	949 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	WDR20	Q8TBZ3	569 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	NRTN	Q99748	197 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	OR51B5	Q9H339	312 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	REEP1	Q9H902	201 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	RC3H2	Q9HBD1	1191 aa	Known RBP	12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	SIRT5	Q9NXA8	310 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	THUMPD1	Q9NXG2	353 aa	Known RBP	12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	OGDHL	Q9ULD0	1010 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	SH2B3	Q9UQQ2	575 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	FUOM	A2VDF0	154 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	ATG13	O75143	517 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	NDUFS2	O75306	463 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	RHO	P08100	348 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	GSTM1	P09488	218 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	GRSF1	Q12849	480 aa	Known RBP eCLIP	12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	SP140	Q13342	867 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	NR1D2	Q14995	579 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	ARHGEF6	Q15052	776 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	CDKL4	Q5MAI5	379 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	LIPJ	Q5W064	366 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	ZDHHC20	Q5W0Z9	365 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	RNF165	Q6ZSG1	346 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	TRMT11	Q7Z4G4	463 aa	Known RBP	12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	SERPINA11	Q86U17	422 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	OR4A15	Q8NGL6	344 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	DNAJB8	Q8NHS0	232 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	BTN2A2	Q8WVV5	523 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	GLMN	Q92990	594 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	GLYATL1	Q969I3	302 aa		12.43	□□□□□ -0.42
SMTN-222	ENST00000612341	PNMA8B	Q9ULN7	279 aa	Predicted RBP	12.43	□□□□□ -0.42
SMTN-222	ENST00000612341		H3BM21	787 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	KPNA5	O15131	536 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	PCDH7	O60245	1069 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	SLCO2B1	O94956	709 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	UBL4A	P11441	157 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	PPM1A	P35813	382 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	OCA2	Q04671	838 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	ZNF829	Q3KNS6	432 aa	Predicted RBP	12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	WDR45B	Q5MNZ6	344 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	HENMT1	Q5T8I9	393 aa	Known RBP	12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	LILRA6	Q6PI73	481 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	GALNT13	Q8IUC8	556 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	DDHD1	Q8NEL9	900 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	RORB	Q92753	470 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	BORCS5	Q969J3	196 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	FOPNL	Q96NB1	174 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	OR2AG1	Q9H205	316 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	TMEM9	Q9P0T7	183 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	KLHL42	Q9P2K6	505 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	SPAST	Q9UBP0	616 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	FAM20B	O75063	409 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	ETFA	P13804	333 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	JUNB	P17275	347 aa	Predicted RBP	12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	SYN1	P17600	705 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	DNAJA1	P31689	397 aa	Known RBP	12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	DGKE	P52429	567 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	VBP1	P61758	197 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	FPGS	Q05932	587 aa		12.42	□□□□□ -0.42
SMTN-222	ENST00000612341	TCEAL5	Q5H9L2	206 aa		12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms