RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 SGPP1Q9BX95 441 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 ATG10Q9H0Y0 220 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 ANKHQ9HCJ1 492 aa16.78■□□□□ 0.28
SSBP1-215ENST00000612337 FEZF1A0PJY2 475 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 A8MUI8 341 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 LCMT2O60294 686 aaKnown RBP16.77■□□□□ 0.28
SSBP1-215ENST00000612337 MST1P26927 711 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 NAE1Q13564 534 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 BTBD16Q32M84 506 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 CAPN13Q6MZZ7 669 aaPredicted RBP16.77■□□□□ 0.28
SSBP1-215ENST00000612337 H3F3CQ6NXT2 135 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 PAQR3Q6TCH7 311 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 TMEM207Q6UWW9 146 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 ANKRD37Q7Z713 158 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 SLC26A11Q86WA9 606 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 PDSS2Q86YH6 399 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 MYO1HQ8N1T3 1032 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 KCT2Q8NC54 265 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 ZCCHC10Q8TBK6 192 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 SLC13A3Q8WWT9 602 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 ZNF354BQ96LW1 612 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 COPG2Q9UBF2 871 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 SEC14L3Q9UDX4 400 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 SLC22A7Q9Y694 548 aa16.77■□□□□ 0.28
SSBP1-215ENST00000612337 OR2W5A6NFC9 320 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 RDH16O75452 317 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 UNC5CO95185 931 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 TTC4O95801 387 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 SLC35G6P0C7Q6 338 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 CDH1P12830 882 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 NPPBP16860 134 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 IL10P22301 178 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 GABRB3P28472 473 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 DHX9Q08211 1270 aaKnown RBP16.76■□□□□ 0.27
SSBP1-215ENST00000612337 EXT1Q16394 746 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.76■□□□□ 0.27
SSBP1-215ENST00000612337 ZNF766Q5HY98 468 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 ACER2Q5QJU3 275 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 SP5Q6BEB4 398 aaPredicted RBP16.76■□□□□ 0.27
SSBP1-215ENST00000612337 KIAA0408Q6ZU52 694 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 CNTN4Q8IWV2 1026 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 MFSD9Q8NBP5 474 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 PLPP5Q8NEB5 264 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 M1APQ8TC57 530 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 ACTRT1Q8TDG2 376 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 MARVELD3Q96A59 401 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 ALKBH8Q96BT7 664 aaKnown RBP16.76■□□□□ 0.27
SSBP1-215ENST00000612337 HAUS8Q9BT25 410 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 SARGQ9BW04 601 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 NAALAD2Q9Y3Q0 740 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 PCDHGB6Q9Y5F9 930 aa16.76■□□□□ 0.27
SSBP1-215ENST00000612337 GOLGA6L10A0A0M3HER8 536 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 ARHGAP10A1A4S6 786 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 PRSS44E7EML9 344 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 HIST1H2AGP0C0S8 130 aaPredicted RBP16.75■□□□□ 0.27
SSBP1-215ENST00000612337 HIST1H2ADP20671 130 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 CDKN2DP55273 166 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 HERC3Q15034 1050 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 PPP1R7Q15435 360 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 PHKG1Q16816 387 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 SPANXN3Q5MJ09 141 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 RBM20Q5T481 1227 aaKnown RBP16.75■□□□□ 0.27
SSBP1-215ENST00000612337 GALNT7Q86SF2 657 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 BEST3Q8N1M1 668 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 AFAP1L2Q8N4X5 818 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 ABHD11Q8NFV4 315 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 LINGO1Q96FE5 620 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 HIST1H2AHQ96KK5 128 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 OR1F2PQ96R84 312 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 HIST1H2AJQ99878 128 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 H2AFJQ9BTM1 129 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 KCNK13Q9HB14 408 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 MMP25Q9NPA2 562 aa16.75■□□□□ 0.27
SSBP1-215ENST00000612337 SUCOQ9UBS9 1254 aaKnown RBP16.75■□□□□ 0.27
SSBP1-215ENST00000612337 PCNX1Q96RV3 2341 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 TRGV8A0A0C4DH27 118 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 TSPAN12O95859 305 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 AHSGP02765 367 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 CA7P43166 264 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 CCR8P51685 355 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 PMP22Q01453 160 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 RHAGQ02094 409 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 SRSF11Q05519 484 aaKnown RBP16.74■□□□□ 0.27
SSBP1-215ENST00000612337 ART3Q13508 389 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 TUBA3CQ13748 450 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 NSDHLQ15738 373 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 MEP1AQ16819 746 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 ZXDCQ2QGD7 858 aaPredicted RBP16.74■□□□□ 0.27
SSBP1-215ENST00000612337 SFT2D3Q587I9 215 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 DUPD1Q68J44 220 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 FCRLBQ6BAA4 426 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 TUBA3EQ6PEY2 450 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 OR4K1Q8NGD4 311 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 OR56A3Q8NH54 315 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 ITLN2Q8WWU7 325 aaPredicted RBP16.74■□□□□ 0.27
SSBP1-215ENST00000612337 PEX11GQ96HA9 241 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 OSBPL9Q96SU4 736 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 NAT9Q9BTE0 207 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 LANCL2Q9NS86 450 aa16.74■□□□□ 0.27
SSBP1-215ENST00000612337 KLF2Q9Y5W3 355 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms