RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 BTRCQ9Y297 605 aa8.49□□□□□ -1.05
SMAD4-217ENST00000611848 TRAF6Q9Y4K3 522 aa8.49□□□□□ -1.05
SMAD4-217ENST00000611848 PCDHGA7Q9Y5G6 932 aa8.49□□□□□ -1.05
SMAD4-217ENST00000611848 COPG1Q9Y678 874 aaKnown RBP8.49□□□□□ -1.05
SMAD4-217ENST00000611848 ANKRD11Q6UB99 2663 aaPredicted RBP8.49□□□□□ -1.05
SMAD4-217ENST00000611848 ASPMQ8IZT6 3477 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 PABPN1LA6NDY0 278 aaKnown RBP8.48□□□□□ -1.05
SMAD4-217ENST00000611848 ISM1B1AKI9 464 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 AGRPO00253 132 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 NVLO15381 856 aaKnown RBP8.48□□□□□ -1.05
SMAD4-217ENST00000611848 KLK8O60259 260 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 KERAO60938 352 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 HIST1H2AGP0C0S8 130 aaPredicted RBP8.48□□□□□ -1.05
SMAD4-217ENST00000611848 CCL4P13236 92 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 ANPEPP15144 967 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 ITIH1P19827 911 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 HIST1H2ADP20671 130 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 ATP6V1C1P21283 382 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 CD82P27701 267 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 ETV5P41161 510 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 NAA20P61599 178 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 AP2B1P63010 937 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 ACY1Q03154 408 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 TBL3Q12788 808 aaKnown RBP8.48□□□□□ -1.05
SMAD4-217ENST00000611848 CCNIQ14094 377 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 TAF11Q15544 211 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 SLC5A12Q1EHB4 618 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 CCSMST1Q4G0I0 132 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 TMTC4Q5T4D3 741 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 NXNQ6DKJ4 435 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 C16orf89Q6UX73 402 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 CEACAM20Q6UY09 585 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 LRRC74BQ6ZQY2 392 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 D2HGDHQ8N465 521 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 PTGR2Q8N8N7 351 aaPredicted RBP8.48□□□□□ -1.05
SMAD4-217ENST00000611848 BMPERQ8N8U9 685 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 LINC01555Q8NAE3 123 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 FGF11Q92914 225 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 USP7Q93009 1102 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 NAF1Q96HR8 494 aaKnown RBP8.48□□□□□ -1.05
SMAD4-217ENST00000611848 HIST1H2AHQ96KK5 128 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 CCDC138Q96M89 665 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 CATSPER2Q96P56 530 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 TEFMQ96QE5 360 aaKnown RBP8.48□□□□□ -1.05
SMAD4-217ENST00000611848 OR2A14Q96R47 310 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 PKP4Q99569 1192 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 HIST1H2AJQ99878 128 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 ZPBPQ9BS86 351 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 H2AFJQ9BTM1 129 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 DDA1Q9BW61 102 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 TRIM54Q9BYV2 358 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 ASPSCR1Q9BZE9 553 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 ASCL3Q9NQ33 180 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 SIDT1Q9NXL6 827 aaKnown RBP8.48□□□□□ -1.05
SMAD4-217ENST00000611848 NDE1Q9NXR1 346 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 SLC39A1Q9NY26 324 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 SPHK1Q9NYA1 384 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 CIDEBQ9UHD4 219 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 POMPQ9Y244 141 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 PCDHB11Q9Y5F2 797 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 PCDHGA3Q9Y5H0 932 aa8.48□□□□□ -1.05
SMAD4-217ENST00000611848 A0A0J9YY10 115 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 PMS2P1A4D2B8 440 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 POLR1CO15160 346 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 PRICKLE3O43900 615 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 SUPT7LO94864 414 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 RPSAP08865 295 aaKnown RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 ENO2P09104 434 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 ACADSP16219 412 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 UGT2B7P16662 529 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 PEBP1P30086 187 aaKnown RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 ATP4BP51164 291 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 PNLIPRP1P54315 467 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 AP1S2P56377 157 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 SQLEQ14534 574 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 IL11RAQ14626 422 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 ZRSR2Q15696 482 aaKnown RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 DCAF12Q5T6F0 453 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 LCE2DQ5TA82 110 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 LARP4Q71RC2 724 aaKnown RBP eCLIP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 RPS27LQ71UM5 84 aaKnown RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 BPHLQ86WA6 291 aaPredicted RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 DSELQ8IZU8 1212 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 CLYBLQ8N0X4 340 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 PGAM4Q8N0Y7 254 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 FLVCR1-AS1Q8TAF5 88 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 STAG3L4Q8TBR4 150 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 DNAJC9Q8WXX5 260 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 SMPDL3AQ92484 453 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 DLG3Q92796 817 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 PPM1MQ96MI6 270 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 TRAPPC9Q96Q05 1148 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 C1QTNF3Q9BXJ4 246 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 CHRNA10Q9GZZ6 450 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 S100A14Q9HCY8 104 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 PRM3Q9NNZ6 103 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 PDE7BQ9NP56 450 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 INTS7Q9NVH2 962 aaKnown RBP8.47□□□□□ -1.05
SMAD4-217ENST00000611848 NMRK1Q9NWW6 199 aa8.47□□□□□ -1.05
SMAD4-217ENST00000611848 ADAMTS6Q9UKP5 1117 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms