RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 OCMP0CE72 109 aaPredicted RBP16.61■□□□□ 0.25
NEK3-206ENST00000611833 WEE1P30291 646 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 HOXA9P31269 272 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 EPHA5P54756 1037 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 SLC35A2P78381 396 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 SPIN4Q56A73 249 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 TMEM220Q6QAJ8 160 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 PIWIL3Q7Z3Z3 882 aaKnown RBP16.61■□□□□ 0.25
NEK3-206ENST00000611833 TECPR1Q7Z6L1 1165 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 TSPYL5Q86VY4 417 aaPredicted RBP16.61■□□□□ 0.25
NEK3-206ENST00000611833 ZNF557Q8N988 423 aaPredicted RBP16.61■□□□□ 0.25
NEK3-206ENST00000611833 GLYATL1Q969I3 302 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 MAL2Q969L2 176 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 FAM83CQ9BQN1 747 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 CRISPLD2Q9H0B8 497 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 RASSF1Q9NS23 344 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 VPS4AQ9UN37 437 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 MAPRE3Q9UPY8 281 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 KCNE2Q9Y6J6 123 aa16.61■□□□□ 0.25
NEK3-206ENST00000611833 TIMP1P01033 207 aa16.6■□□□□ 0.25
NEK3-206ENST00000611833 SYN1P17600 705 aa16.6■□□□□ 0.25
NEK3-206ENST00000611833 EPHA2P29317 976 aa16.6■□□□□ 0.25
NEK3-206ENST00000611833 TMEM115Q12893 351 aaPredicted RBP16.6■□□□□ 0.25
NEK3-206ENST00000611833 TSTA3Q13630 321 aaPredicted RBP16.6■□□□□ 0.25
NEK3-206ENST00000611833 ATP1A4Q13733 1029 aa16.6■□□□□ 0.25
NEK3-206ENST00000611833 RGNQ15493 299 aa16.6■□□□□ 0.25
NEK3-206ENST00000611833 ZNF77Q15935 545 aa16.6■□□□□ 0.25
NEK3-206ENST00000611833 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.6■□□□□ 0.25
NEK3-206ENST00000611833 LAIR1Q6GTX8 287 aa16.6■□□□□ 0.25
NEK3-206ENST00000611833 DCDC5Q6ZRR9 648 aa16.6■□□□□ 0.25
NEK3-206ENST00000611833 TMCO5AQ8N6Q1 288 aa16.6■□□□□ 0.25
NEK3-206ENST00000611833 ZNF366Q8N895 744 aa16.6■□□□□ 0.25
NEK3-206ENST00000611833 OR4A15Q8NGL6 344 aa16.6■□□□□ 0.25
NEK3-206ENST00000611833 CHTF18Q8WVB6 975 aa16.6■□□□□ 0.25
NEK3-206ENST00000611833 AP2M1Q96CW1 435 aa16.6■□□□□ 0.25
NEK3-206ENST00000611833 NFKBIL1Q9UBC1 381 aaPredicted RBP16.6■□□□□ 0.25
NEK3-206ENST00000611833 IL36AQ9UHA7 158 aa16.6■□□□□ 0.25
NEK3-206ENST00000611833 SLC5A10A0PJK1 596 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 RGS10O43665 173 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 EFCAB14O75071 495 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 RHOP08100 348 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 ELFN1P0C7U0 828 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 IDSP22304 550 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 PSMB9P28065 219 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 PDHA2P29803 388 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 PRLHRP49683 370 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 RPS13P62277 151 aaKnown RBP16.59■□□□□ 0.25
NEK3-206ENST00000611833 ITGADQ13349 1161 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 MAD2L1BPQ15013 274 aaPredicted RBP16.59■□□□□ 0.25
NEK3-206ENST00000611833 SMN1Q16637 294 aaKnown RBP16.59■□□□□ 0.25
NEK3-206ENST00000611833 TMPRSS11BQ86T26 416 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 PARP8Q8N3A8 854 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 CPA6Q8N4T0 437 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 OR56A3Q8NH54 315 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 ZFP90Q8TF47 636 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 C1orf226A1L170 272 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 M0R3G1 203 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 ZNF197O14709 1029 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 NPC1O15118 1278 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 GABARAPO95166 117 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 FADS2O95864 444 aaKnown RBP16.59■□□□□ 0.25
NEK3-206ENST00000611833 MT-ND2P03891 347 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 DDX6P26196 483 aaKnown RBP eCLIP16.59■□□□□ 0.25
NEK3-206ENST00000611833 CD6P30203 668 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 OPRL1P41146 370 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 PSMD7P51665 324 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 RPP38P78345 283 aaKnown RBP16.59■□□□□ 0.25
NEK3-206ENST00000611833 HTRA3P83110 453 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 NPRL3Q12980 569 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 GAB1Q13480 694 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 DGCR6Q14129 220 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 GRIN2CQ14957 1233 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 LRRC26Q2I0M4 334 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 ZNF805Q5CZA5 627 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 PLPP4Q5VZY2 271 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 MED27Q6P2C8 311 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 DPPA4Q7L190 304 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 SLCO6A1Q86UG4 719 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 NAGSQ8N159 534 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 CENPSQ8N2Z9 138 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 SVOPQ8N4V2 548 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 NEIL2Q969S2 332 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 ZSWIM3Q96MP5 696 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 VPS35Q96QK1 796 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 LMCD1Q9NZU5 365 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 ITM2BQ9Y287 266 aa16.59■□□□□ 0.25
NEK3-206ENST00000611833 MTCL1Q9Y4B5 1905 aaKnown RBP16.59■□□□□ 0.25
NEK3-206ENST00000611833 NOTCH4Q99466 2003 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 H3BM21 787 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 AXIN1O15169 862 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 PCDH7O60245 1069 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 PTPN2P17706 415 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 TIA1P31483 386 aaKnown RBP eCLIP16.58■□□□□ 0.25
NEK3-206ENST00000611833 CRATP43155 626 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 MAPK9P45984 424 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 ST13P50502 369 aaKnown RBP16.58■□□□□ 0.25
NEK3-206ENST00000611833 LSM3P62310 102 aaKnown RBP16.58■□□□□ 0.25
NEK3-206ENST00000611833 KCNJ10P78508 379 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 NTHL1P78549 312 aa16.58■□□□□ 0.25
NEK3-206ENST00000611833 ARHGAP15Q53QZ3 475 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms