RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 EPORP19235 508 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 IMPDH1P20839 514 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 HPDP32754 393 aaPredicted RBP13.59□□□□□ -0.23
CTSA-219ENST00000607841 HNF4AP41235 474 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 PRKAA2P54646 552 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 NAA20P61599 178 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 HERVK_113P63132 956 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 TLE3Q04726 772 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 FAM53BQ14153 422 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 E2F2Q14209 437 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 CASP8Q14790 479 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 ZYG11AQ6WRX3 759 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 CCDC81Q6ZN84 652 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 ZSCAN1Q8NBB4 408 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 MAGEB10Q96LZ2 347 aaPredicted RBP13.59□□□□□ -0.23
CTSA-219ENST00000607841 ERVK-6Q9BXR3 956 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 CHST8Q9H2A9 424 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 SPNS1Q9H2V7 528 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 NOL11Q9H8H0 719 aaKnown RBP13.59□□□□□ -0.23
CTSA-219ENST00000607841 SYNPO2LQ9H987 977 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 PRM3Q9NNZ6 103 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 IFT80Q9P2H3 777 aaPredicted RBP13.59□□□□□ -0.23
CTSA-219ENST00000607841 GPN3Q9UHW5 284 aaPredicted RBP13.59□□□□□ -0.23
CTSA-219ENST00000607841 PCTPQ9UKL6 214 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 EMCNQ9ULC0 261 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 SSUH2Q9Y2M2 353 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 PLLPQ9Y342 182 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 FREM2Q5SZK8 3169 aa13.59□□□□□ -0.23
CTSA-219ENST00000607841 ADAMTS20P59510 1910 aa13.58□□□□□ -0.23
CTSA-219ENST00000607841 LRRC14BA6NHZ5 514 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 P2RX6O15547 441 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 SUPT7LO94864 414 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 RPS17P08708 135 aaKnown RBP13.58□□□□□ -0.24
CTSA-219ENST00000607841 RAB40ALP0C0E4 278 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 LIFP15018 202 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 CPA3P15088 417 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 SERPINB1P30740 379 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 ARL1P40616 181 aaPredicted RBP13.58□□□□□ -0.24
CTSA-219ENST00000607841 AVPR1BP47901 424 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 CCNG1P51959 295 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 TMPRSS3P57727 454 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 SKP1P63208 163 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 DNASE1L3Q13609 305 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 NKAIN1Q4KMZ8 207 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 ZNF678Q5SXM1 525 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 ZNF385CQ66K41 422 aaPredicted RBP13.58□□□□□ -0.24
CTSA-219ENST00000607841 GRHL2Q6ISB3 625 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 TMEM214Q6NUQ4 689 aaKnown RBP13.58□□□□□ -0.24
CTSA-219ENST00000607841 NIPAL1Q6NVV3 410 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 MED27Q6P2C8 311 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 FAM199XQ6PEV8 388 aaPredicted RBP13.58□□□□□ -0.24
CTSA-219ENST00000607841 VASH2Q86V25 355 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 MYLK4Q86YV6 388 aaPredicted RBP13.58□□□□□ -0.24
CTSA-219ENST00000607841 NT5CQ8TCD5 201 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 CT55Q8WUE5 264 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 REPS1Q96D71 796 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 DRC3Q9H069 523 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 ZNF304Q9HCX3 659 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 ADGRE2Q9UHX3 823 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 PADI2Q9Y2J8 665 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 ACTL7BQ9Y614 415 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 EPG5Q9HCE0 2579 aa13.58□□□□□ -0.24
CTSA-219ENST00000607841 MAP1BP46821 2468 aaKnown RBP13.57□□□□□ -0.24
CTSA-219ENST00000607841 G3V2L1 256 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 PRAMEF4O60810 478 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 SPAG7O75391 227 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 CLEC3AO75596 197 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 CLDN9O95484 217 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 MLYCDO95822 493 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 ONECUT2O95948 504 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 OTCP00480 354 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 ALBP02768 609 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 SERPINA6P08185 405 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 H2AFXP16104 143 aaPredicted RBP13.57□□□□□ -0.24
CTSA-219ENST00000607841 ITPKBP27987 946 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 STXBP1P61764 594 aaKnown RBP13.57□□□□□ -0.24
CTSA-219ENST00000607841 CYP4F2P78329 520 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 MC1RQ01726 317 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 ASPHQ12797 758 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 HERC3Q15034 1050 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 PRAMEF9Q5VWM5 478 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 MLIPQ5VWP3 458 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 ABHD13Q7L211 337 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 HDXQ7Z353 690 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.57□□□□□ -0.24
CTSA-219ENST00000607841 ANKRD53Q8N9V6 530 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 L3MBTL4Q8NA19 623 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 TCP10LQ8TDR4 215 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 ZNF483Q8TF39 744 aaPredicted RBP13.57□□□□□ -0.24
CTSA-219ENST00000607841 COL26A1Q96A83 441 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 L3HYPDHQ96EM0 354 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 SLC45A3Q96JT2 553 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 PKNOX2Q96KN3 472 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 C10orf90Q96M02 699 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 NTMT1Q9BV86 223 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 RHBGQ9H310 441 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 AKIRIN1Q9H9L7 192 aaPredicted RBP13.57□□□□□ -0.24
CTSA-219ENST00000607841 ANKHQ9HCJ1 492 aa13.57□□□□□ -0.24
CTSA-219ENST00000607841 SSU72Q9NP77 194 aaKnown RBP13.57□□□□□ -0.24
CTSA-219ENST00000607841 SEMA4BQ9NPR2 832 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms