RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 DUX4L7P0CJ90 424 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 TXNP10599 105 aaKnown RBP8.59□□□□□ -1.03
COMMD3-215ENST00000602574 RALAP11233 206 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 HNF1AP20823 631 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 KLRC2P26717 231 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 MAPK1P28482 360 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 MCM7P33993 719 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 MPIP34949 423 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 HTR5AP47898 357 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 CSNK1DP48730 415 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 GLUD2P49448 558 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 ATXN3P54252 364 aaPredicted RBP8.59□□□□□ -1.03
COMMD3-215ENST00000602574 RAB2AP61019 212 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 TNFRSF9Q07011 255 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 MESDQ14696 234 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 NPY5RQ15761 445 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 ZNF239Q16600 458 aaKnown RBP8.59□□□□□ -1.03
COMMD3-215ENST00000602574 MPEG1Q2M385 716 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 COL13A1Q5TAT6 717 aaPredicted RBP8.59□□□□□ -1.03
COMMD3-215ENST00000602574 TTC23Q5W5X9 447 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 SPNS3Q6ZMD2 512 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 C7orf31Q8N865 590 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 GMCL1P1Q8NEA9 526 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 OR10H5Q8NGA6 315 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 OR9A2Q8NGT5 310 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 OLIG1Q8TAK6 271 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 UBASH3BQ8TF42 649 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 LRRC46Q96FV0 321 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 WDFY2Q96P53 400 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 TMED9Q9BVK6 235 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 WDR26Q9H7D7 661 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 IL26Q9NPH9 171 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 DUX4Q9UBX2 424 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 PLEKHA6Q9Y2H5 1048 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 CNTNAP5Q8WYK1 1306 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 COL18A1P39060 1754 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 A0A1W2PP18 115 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 OR6C75A6NL08 312 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 IQCF5A8MTL0 148 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 VSTM5A8MXK1 200 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 M0QZ92 97 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 DDX39AO00148 427 aaKnown RBP8.59□□□□□ -1.03
COMMD3-215ENST00000602574 CBX4O00257 560 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 NKRFO15226 690 aaKnown RBP eCLIP8.59□□□□□ -1.03
COMMD3-215ENST00000602574 CACNG3O60359 315 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 PLIN3O60664 434 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 ATXN1LP0C7T5 689 aaKnown RBP8.59□□□□□ -1.03
COMMD3-215ENST00000602574 ELNP15502 786 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 UQCRC2P22695 453 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 ELK4P28324 431 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 CD68P34810 354 aaPredicted RBP8.59□□□□□ -1.03
COMMD3-215ENST00000602574 FEN1P39748 380 aaKnown RBP8.59□□□□□ -1.03
COMMD3-215ENST00000602574 MC3RP41968 323 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 EPHB3P54753 998 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 DCDP81605 110 aaKnown RBP8.59□□□□□ -1.03
COMMD3-215ENST00000602574 RPA4Q13156 261 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 P2RY14Q15391 338 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 RNASE10Q5GAN6 216 aaKnown RBP8.59□□□□□ -1.03
COMMD3-215ENST00000602574 PRAMEF13Q5VWM6 474 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 IER5Q5VY09 327 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 CES5AQ6NT32 575 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 TMEM17Q86X19 198 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 ZC3H3Q8IXZ2 948 aaKnown RBP8.59□□□□□ -1.03
COMMD3-215ENST00000602574 DUSP18Q8NEJ0 188 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 HMCESQ96FZ2 354 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 AURKBQ96GD4 344 aaPredicted RBP8.59□□□□□ -1.03
COMMD3-215ENST00000602574 MRGPRX4Q96LA9 322 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 LENG8Q96PV6 779 aaPredicted RBP8.59□□□□□ -1.03
COMMD3-215ENST00000602574 TXN2Q99757 166 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 SYT11Q9BT88 431 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 FN3KQ9H479 309 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 ZNF385DQ9H6B1 395 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 SLC28A3Q9HAS3 691 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 PARD6AQ9NPB6 346 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 SEC14L3Q9UDX4 400 aa8.59□□□□□ -1.03
COMMD3-215ENST00000602574 INTS6Q9UL03 887 aaKnown RBP8.59□□□□□ -1.03
COMMD3-215ENST00000602574 A0A0A0MRY4 1105 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 PP2D1A8MPX8 630 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 GSG1L2A8MUP6 293 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 B4E171 279 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 MCIDASD6RGH6 385 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 MKRN2OSH3BPM6 223 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 DLEU1O43261 78 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 DCXO43602 365 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 FADS1O60427 444 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 LY86O95711 162 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 CXCL14O95715 111 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 SCGB1D2O95969 90 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 GLUD1P00367 558 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 OR56A5P0C7T3 313 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 STAG3L1P0CL83 205 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 ALDH4A1P30038 563 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 DDTP30046 118 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 APOBEC3AP31941 199 aaPredicted RBP8.58□□□□□ -1.04
COMMD3-215ENST00000602574 MAP3K8P41279 467 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 HSPA7P48741 367 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 PKIAP61925 76 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 MRPS11P82912 194 aaKnown RBP8.58□□□□□ -1.04
COMMD3-215ENST00000602574 IL18R1Q13478 541 aa8.58□□□□□ -1.04
COMMD3-215ENST00000602574 GK2Q14410 553 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms