RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 AENQ8WTP8 325 aaKnown RBP14.46□□□□□ -0.09
LIG1-219ENST00000600055 MZB1Q8WU39 189 aa14.46□□□□□ -0.09
LIG1-219ENST00000600055 UBTD2Q8WUN7 234 aa14.46□□□□□ -0.09
LIG1-219ENST00000600055 FKBP10Q96AY3 582 aa14.46□□□□□ -0.09
LIG1-219ENST00000600055 MTBPQ96DY7 904 aa14.46□□□□□ -0.09
LIG1-219ENST00000600055 CATSPER2Q96P56 530 aa14.46□□□□□ -0.09
LIG1-219ENST00000600055 CCDC77Q9BR77 488 aa14.46□□□□□ -0.09
LIG1-219ENST00000600055 FAM117AQ9C073 453 aa14.46□□□□□ -0.09
LIG1-219ENST00000600055 DRC3Q9H069 523 aa14.46□□□□□ -0.09
LIG1-219ENST00000600055 SOX17Q9H6I2 414 aaPredicted RBP14.46□□□□□ -0.09
LIG1-219ENST00000600055 GEMIN8Q9NWZ8 242 aaKnown RBP14.46□□□□□ -0.09
LIG1-219ENST00000600055 GPRC5BQ9NZH0 403 aa14.46□□□□□ -0.09
LIG1-219ENST00000600055 XPR1Q9UBH6 696 aa14.46□□□□□ -0.09
LIG1-219ENST00000600055 POLHQ9Y253 713 aa14.46□□□□□ -0.09
LIG1-219ENST00000600055 PADI2Q9Y2J8 665 aa14.46□□□□□ -0.09
LIG1-219ENST00000600055 CCDC189A1A4V9 331 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 GOLGA8RI6L899 631 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 NDUFS4O43181 175 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 KLK8O60259 260 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 H2AFYO75367 372 aaKnown RBP14.45□□□□□ -0.1
LIG1-219ENST00000600055 B3GALT4O96024 378 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 RBP1P09455 135 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 COL6A2P12110 1019 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 IL1RNP18510 177 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 CD22P20273 847 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 OTX2P32243 289 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 FOLR3P41439 243 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 MAT1AQ00266 395 aaKnown RBP14.45□□□□□ -0.1
LIG1-219ENST00000600055 FAM53BQ14153 422 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 DOC2AQ14183 400 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 SETDB1Q15047 1291 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 NDUFA9Q16795 377 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 XKR6Q5GH73 641 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 LRRC70Q7Z2Q7 622 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 PRSS58Q8IYP2 241 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 CYP4X1Q8N118 509 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 TBC1D19Q8N5T2 526 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 AMER3Q8N944 861 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 OR2Y1Q8NGV0 311 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 OR2W6PQ8NHA6 318 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 EPS8L3Q8TE67 593 aaKnown RBP14.45□□□□□ -0.1
LIG1-219ENST00000600055 SPSB2Q99619 263 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 ARHGAP9Q9BRR9 750 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 YIPF2Q9BWQ6 316 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 CAPS2Q9BXY5 557 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 PARD6BQ9BYG5 372 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 SEMA4CQ9C0C4 833 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 OPTCQ9UBM4 332 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 ZFP69BQ9UJL9 534 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 CDC14AQ9UNH5 594 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 MAN2B2Q9Y2E5 1009 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 KCNMB2Q9Y691 235 aa14.45□□□□□ -0.1
LIG1-219ENST00000600055 A0A1W2PPM1 405 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 VSTM2BA6NLU5 285 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 K7EPI3 171 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 SGK494L7N484 410 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 TK2O00142 265 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 SIX3O95343 332 aaPredicted RBP14.44□□□□□ -0.1
LIG1-219ENST00000600055 ALBP02768 609 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 SBK3P0C264 359 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 SLC35G6P0C7Q6 338 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 AHRP35869 848 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 CCR10P46092 362 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 ALDH18A1P54886 795 aaKnown RBP14.44□□□□□ -0.1
LIG1-219ENST00000600055 HYAL2Q12891 473 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 CHAF1BQ13112 559 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 CHIT1Q13231 466 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 DSG2Q14126 1118 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 SSPNQ14714 243 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 TSNAXIP1Q2TAA8 658 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 VWA2Q5GFL6 755 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 CPZQ66K79 652 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 PDSS2Q86YH6 399 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.44□□□□□ -0.1
LIG1-219ENST00000600055 TEX9Q8N6V9 391 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 PTGR2Q8N8N7 351 aaPredicted RBP14.44□□□□□ -0.1
LIG1-219ENST00000600055 NT5CQ8TCD5 201 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 STT3BQ8TCJ2 826 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 CREB3L4Q8TEY5 395 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 APOBEC4Q8WW27 367 aaKnown RBP14.44□□□□□ -0.1
LIG1-219ENST00000600055 SLC39A7Q92504 469 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 PHF21BQ96EK2 531 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 MVB12AQ96EY5 273 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 AICDAQ9GZX7 198 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 SLC26A1Q9H2B4 701 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 KLHL31Q9H511 634 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 WDR54Q9H977 334 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 TRPC4Q9UBN4 977 aa14.44□□□□□ -0.1
LIG1-219ENST00000600055 ZNF282Q9UDV7 671 aaPredicted RBP14.44□□□□□ -0.1
LIG1-219ENST00000600055 MDC1Q14676 2089 aaKnown RBP14.44□□□□□ -0.1
LIG1-219ENST00000600055 ZNF860A6NHJ4 632 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 ARGFXA6NJG6 315 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 DNAJB5O75953 348 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 NSA2O95478 260 aaKnown RBP14.43□□□□□ -0.1
LIG1-219ENST00000600055 PRB1P04280 392 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 CD63P08962 238 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 ZGLP1P0C6A0 271 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 ZNF888P0CJ79 500 aaPredicted RBP14.43□□□□□ -0.1
LIG1-219ENST00000600055 PYGBP11216 843 aa14.43□□□□□ -0.1
LIG1-219ENST00000600055 CXCR2P25025 360 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms