RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 CNOT10Q9H9A5 744 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 PPCSQ9HAB8 311 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 TXLNGQ9NUQ3 528 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 RALYQ9UKM9 306 aaKnown RBP18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 EMCNQ9ULC0 261 aa18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 ZNF490Q9ULM2 529 aaPredicted RBP18.55■□□□□ 0.56
SHKBP1-221ENST00000599833 IGLV3-12A0A075B6K2 115 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 GOLGA8RI6L899 631 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 K7EPI3 171 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 E2F3O00716 465 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 CCNT2O60583 730 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 SIX3O95343 332 aaPredicted RBP18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 UMODP07911 640 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 RBP1P09455 135 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 SMIM10L1P0DMW3 83 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 PYGBP11216 843 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 AGXTP21549 392 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 ALAS2P22557 587 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 AHRP35869 848 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 EFNA3P52797 238 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 FAM53BQ14153 422 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 DOC2AQ14183 400 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 SLBPQ14493 270 aaKnown RBP eCLIP18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 PDK4Q16654 411 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 PFKFB4Q16877 469 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 UGT8Q16880 541 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 MUM1Q2TAK8 710 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 KLC3Q6P597 504 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 SYVN1Q86TM6 617 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 PDSS2Q86YH6 399 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 NT5CQ8TCD5 201 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 SLC13A3Q8WWT9 602 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 MVB12AQ96EY5 273 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 SMIM10Q96HG1 83 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 SPSB2Q99619 263 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 MRPL57Q9BQC6 102 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 SLC6A16Q9GZN6 736 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 CTSFQ9UBX1 484 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 ZFP69BQ9UJL9 534 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 MAU2Q9Y6X3 613 aa18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 TLN1Q9Y490 2541 aaKnown RBP18.54■□□□□ 0.56
SHKBP1-221ENST00000599833 OR1F1O43749 312 aa18.53■□□□□ 0.56
SHKBP1-221ENST00000599833 ALBP02768 609 aa18.53■□□□□ 0.56
SHKBP1-221ENST00000599833 PRKAR1AP10644 381 aa18.53■□□□□ 0.56
SHKBP1-221ENST00000599833 RPS15P62841 145 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-221ENST00000599833 TBCCQ15814 346 aa18.53■□□□□ 0.56
SHKBP1-221ENST00000599833 NKG7Q16617 165 aa18.53■□□□□ 0.56
SHKBP1-221ENST00000599833 TBR1Q16650 682 aa18.53■□□□□ 0.56
SHKBP1-221ENST00000599833 PRMT9Q6P2P2 845 aa18.53■□□□□ 0.56
SHKBP1-221ENST00000599833 C16orf46Q6P387 395 aa18.53■□□□□ 0.56
SHKBP1-221ENST00000599833 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.53■□□□□ 0.56
SHKBP1-221ENST00000599833 CAMKVQ8NCB2 501 aa18.53■□□□□ 0.56
SHKBP1-221ENST00000599833 AIF1LQ9BQI0 150 aa18.53■□□□□ 0.56
SHKBP1-221ENST00000599833 CCDC77Q9BR77 488 aa18.53■□□□□ 0.56
SHKBP1-221ENST00000599833 MRPL46Q9H2W6 279 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-221ENST00000599833 NT5DC2Q9H857 520 aa18.53■□□□□ 0.56
SHKBP1-221ENST00000599833 IFT80Q9P2H3 777 aaPredicted RBP18.53■□□□□ 0.56
SHKBP1-221ENST00000599833 CPSF2Q9P2I0 782 aaKnown RBP18.53■□□□□ 0.56
SHKBP1-221ENST00000599833 LGALS13Q9UHV8 139 aa18.53■□□□□ 0.56
SHKBP1-221ENST00000599833 A0A0A6YYC8 382 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 I3L1I5 382 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 TXNDC9O14530 226 aa18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 CDH16O75309 829 aa18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 S100BP04271 92 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 GRK3P35626 688 aa18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 PWP1Q13610 501 aa18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 DSG2Q14126 1118 aa18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 ERV3-1Q14264 604 aa18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 MLIPQ5VWP3 458 aa18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 LCA5Q86VQ0 697 aa18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 PTGR2Q8N8N7 351 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 SNX31Q8N9S9 440 aa18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 OR2Y1Q8NGV0 311 aa18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 C1QTNF3Q9BXJ4 246 aa18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 CAPS2Q9BXY5 557 aa18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 DRC3Q9H069 523 aa18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 KLHL31Q9H511 634 aa18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 ZBTB26Q9HCK0 441 aa18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 ZNF304Q9HCX3 659 aa18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 RRAGDQ9NQL2 400 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 NDOR1Q9UHB4 597 aa18.52■□□□□ 0.56
SHKBP1-221ENST00000599833 SMIM23A6NLE4 172 aa18.51■□□□□ 0.55
SHKBP1-221ENST00000599833 A8MT66 165 aa18.51■□□□□ 0.55
SHKBP1-221ENST00000599833 STX16-NPEPL1H3BU86 382 aa18.51■□□□□ 0.55
SHKBP1-221ENST00000599833 STX16O14662 325 aa18.51■□□□□ 0.55
SHKBP1-221ENST00000599833 NDUFS4O43181 175 aa18.51■□□□□ 0.55
SHKBP1-221ENST00000599833 DNAJB6O75190 326 aa18.51■□□□□ 0.55
SHKBP1-221ENST00000599833 NSA2O95478 260 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-221ENST00000599833 ITGB2P05107 769 aa18.51■□□□□ 0.55
SHKBP1-221ENST00000599833 RPS17P08708 135 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-221ENST00000599833 GFAPP14136 432 aa18.51■□□□□ 0.55
SHKBP1-221ENST00000599833 SLC18A2Q05940 514 aa18.51■□□□□ 0.55
SHKBP1-221ENST00000599833 CHIT1Q13231 466 aa18.51■□□□□ 0.55
SHKBP1-221ENST00000599833 METTL2BQ6P1Q9 378 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-221ENST00000599833 GOLGA7Q7Z5G4 137 aa18.51■□□□□ 0.55
SHKBP1-221ENST00000599833 ZSCAN1Q8NBB4 408 aa18.51■□□□□ 0.55
SHKBP1-221ENST00000599833 OR9A4Q8NGU2 314 aa18.51■□□□□ 0.55
SHKBP1-221ENST00000599833 EXTL1Q92935 676 aa18.51■□□□□ 0.55
SHKBP1-221ENST00000599833 PTCD3Q96EY7 689 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-221ENST00000599833 NSUN5Q96P11 429 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms