RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 MAGEA4P43358 317 aa17.76■□□□□ 0.43
PNKP-213ENST00000599543 RGS4P49798 205 aa17.76■□□□□ 0.43
PNKP-213ENST00000599543 RPS15AP62244 130 aaKnown RBP17.76■□□□□ 0.43
PNKP-213ENST00000599543 MGAT5Q09328 741 aa17.76■□□□□ 0.43
PNKP-213ENST00000599543 SYT16Q17RD7 645 aa17.76■□□□□ 0.43
PNKP-213ENST00000599543 ZC3H7AQ8IWR0 971 aaKnown RBP17.76■□□□□ 0.43
PNKP-213ENST00000599543 ARHGEF39Q8N4T4 335 aa17.76■□□□□ 0.43
PNKP-213ENST00000599543 SIRT6Q8N6T7 355 aa17.76■□□□□ 0.43
PNKP-213ENST00000599543 MCOLN3Q8TDD5 553 aa17.76■□□□□ 0.43
PNKP-213ENST00000599543 PCBD2Q9H0N5 130 aa17.76■□□□□ 0.43
PNKP-213ENST00000599543 TMEM184CQ9NVA4 438 aa17.76■□□□□ 0.43
PNKP-213ENST00000599543 MKL2Q9ULH7 1088 aa17.76■□□□□ 0.43
PNKP-213ENST00000599543 EIF3HO15372 352 aaKnown RBP eCLIP17.75■□□□□ 0.43
PNKP-213ENST00000599543 STATHP02808 62 aa17.75■□□□□ 0.43
PNKP-213ENST00000599543 C8GP07360 202 aa17.75■□□□□ 0.43
PNKP-213ENST00000599543 EDN3P14138 238 aa17.75■□□□□ 0.43
PNKP-213ENST00000599543 SOX11P35716 441 aa17.75■□□□□ 0.43
PNKP-213ENST00000599543 AP2B1P63010 937 aa17.75■□□□□ 0.43
PNKP-213ENST00000599543 MAT1AQ00266 395 aaKnown RBP17.75■□□□□ 0.43
PNKP-213ENST00000599543 TEX35Q5T0J7 233 aa17.75■□□□□ 0.43
PNKP-213ENST00000599543 RIPOR1Q6ZS17 1223 aa17.75■□□□□ 0.43
PNKP-213ENST00000599543 CNTN4Q8IWV2 1026 aa17.75■□□□□ 0.43
PNKP-213ENST00000599543 CATSPER1Q8NEC5 780 aa17.75■□□□□ 0.43
PNKP-213ENST00000599543 OR1N1Q8NGS0 311 aa17.75■□□□□ 0.43
PNKP-213ENST00000599543 MAGEB10Q96LZ2 347 aaPredicted RBP17.75■□□□□ 0.43
PNKP-213ENST00000599543 CCDC138Q96M89 665 aa17.75■□□□□ 0.43
PNKP-213ENST00000599543 TAS2R13Q9NYV9 303 aa17.75■□□□□ 0.43
PNKP-213ENST00000599543 MOCS1Q9NZB8 636 aa17.75■□□□□ 0.43
PNKP-213ENST00000599543 ZFATQ9P243 1243 aa17.75■□□□□ 0.43
PNKP-213ENST00000599543 CELSR2Q9HCU4 2923 aa17.75■□□□□ 0.43
PNKP-213ENST00000599543 MYO9AB2RTY4 2548 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 E2F3O00716 465 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 WFS1O76024 890 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 BMP10O95393 424 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 CLDN1O95832 211 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 C8orf89P0DMQ9 161 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 ECHS1P30084 290 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 CDKN2DP55273 166 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 TIAL1Q01085 375 aaKnown RBP eCLIP17.74■□□□□ 0.43
PNKP-213ENST00000599543 SP140Q13342 867 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 EFTUD2Q15029 972 aaKnown RBP eCLIP17.74■□□□□ 0.434e-7■■■□□ 19.2
PNKP-213ENST00000599543 GLE1Q53GS7 698 aaKnown RBP17.74■□□□□ 0.43
PNKP-213ENST00000599543 MFSD4BQ5TF39 518 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 RPUSD3Q6P087 351 aaKnown RBP17.74■□□□□ 0.43
PNKP-213ENST00000599543 C3orf62Q6ZUJ4 267 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 STRA8Q7Z7C7 330 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 MYO1HQ8N1T3 1032 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 BCORP1Q8N888 145 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 GPATCH11Q8N954 259 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 OR9A4Q8NGU2 314 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 EEF1AKMT1Q8WVE0 214 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 METTL21AQ8WXB1 218 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 PSMF1Q92530 271 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 ZNF700Q9H0M5 742 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 L2HGDHQ9H9P8 463 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 PARVBQ9HBI1 364 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 OLAHQ9NV23 265 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 ADAMTS6Q9UKP5 1117 aa17.74■□□□□ 0.43
PNKP-213ENST00000599543 MRPS2Q9Y399 296 aaKnown RBP17.74■□□□□ 0.43
PNKP-213ENST00000599543 KCNE1BA0A087WTH5 132 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 LOC102723996A0A087X1L8 192 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 TRAV17A0A0B4J275 112 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 TCRBV9S1A1TA0A576 114 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 H0YIG0 161 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 NSA2O95478 260 aaKnown RBP17.73■□□□□ 0.43
PNKP-213ENST00000599543 ICAM2P13598 275 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 SAT1P21673 171 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 CCND1P24385 295 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 CBLBQ13191 982 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 PCOLCEQ15113 449 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 MINDY4Q4G0A6 757 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 MBOAT1Q6ZNC8 495 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 VN1R4Q7Z5H5 301 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 C17orf64Q86WR6 236 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 GSPT2Q8IYD1 628 aaKnown RBP17.73■□□□□ 0.43
PNKP-213ENST00000599543 THAP11Q96EK4 314 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 SLX1AQ9BQ83 275 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 TUBB6Q9BUF5 446 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 PLA2G3Q9NZ20 509 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 NFU1Q9UMS0 254 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 PDE10AQ9Y233 779 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 OSGIN2Q9Y236 505 aa17.73■□□□□ 0.43
PNKP-213ENST00000599543 PABPN1LA6NDY0 278 aaKnown RBP17.72■□□□□ 0.43
PNKP-213ENST00000599543 CELA2AP08217 269 aa17.72■□□□□ 0.43
PNKP-213ENST00000599543 HIST1H2AGP0C0S8 130 aaPredicted RBP17.72■□□□□ 0.43
PNKP-213ENST00000599543 HIST1H2ADP20671 130 aa17.72■□□□□ 0.43
PNKP-213ENST00000599543 GRK3P35626 688 aa17.72■□□□□ 0.43
PNKP-213ENST00000599543 TNFSF10P50591 281 aa17.72■□□□□ 0.43
PNKP-213ENST00000599543 PER3P56645 1201 aa17.72■□□□□ 0.43
PNKP-213ENST00000599543 FRG1Q14331 258 aaKnown RBP17.72■□□□□ 0.43
PNKP-213ENST00000599543 INAQ16352 499 aa17.72■□□□□ 0.43
PNKP-213ENST00000599543 AGTRAPQ6RW13 159 aa17.72■□□□□ 0.43
PNKP-213ENST00000599543 TMEM205Q6UW68 189 aa17.72■□□□□ 0.43
PNKP-213ENST00000599543 FBF1Q8TES7 1133 aa17.72■□□□□ 0.43
PNKP-213ENST00000599543 HAS2Q92819 552 aa17.72■□□□□ 0.43
PNKP-213ENST00000599543 ALKBH8Q96BT7 664 aaKnown RBP17.72■□□□□ 0.43
PNKP-213ENST00000599543 MRRFQ96E11 262 aaKnown RBP17.72■□□□□ 0.43
PNKP-213ENST00000599543 LINGO1Q96FE5 620 aa17.72■□□□□ 0.43
PNKP-213ENST00000599543 HIST1H2AHQ96KK5 128 aa17.72■□□□□ 0.43
PNKP-213ENST00000599543 OLFM1Q99784 485 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms