RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 PRAMEF33A0A0G2JMD5 474 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 OR52A4PA6NMU1 304 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 H0Y8X5 98 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 CACNB4O00305 520 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 ANXA6P08133 673 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 UMPSP11172 480 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 ACADMP11310 421 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 FASP25445 335 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 MRPS35P82673 323 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 TPRG1LQ5T0D9 272 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 C6orf52Q5T4I8 152 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 C10orf62Q5T681 223 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 TMEM154Q6P9G4 183 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 C17orf64Q86WR6 236 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 SH3KBP1Q96B97 665 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 XKR8Q9H6D3 395 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 CARS2Q9HA77 564 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 SPATA7Q9P0W8 599 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 NCKAP1Q9Y2A7 1128 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 AP4B1Q9Y6B7 739 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 NUP214P35658 2090 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 ELOVL7A1L3X0 281 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 SAC3D1A6NKF1 404 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 FPGTO14772 594 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 DENRO43583 198 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 TBX6O95947 436 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 LYNP07948 512 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 C7P10643 843 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 IDSP22304 550 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 HSD17B2P37059 387 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 PIK3CBP42338 1070 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 ASMTP46597 345 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 POLE2P56282 527 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 RBBP5Q15291 538 aaKnown RBP16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 EPHX4Q8IUS5 362 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 FAM86B1Q8N7N1 296 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 SMPDL3AQ92484 453 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 SCARF2Q96GP6 870 aaPredicted RBP16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 CAMK1GQ96NX5 476 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 PANX1Q96RD7 426 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 GORASP2Q9H8Y8 452 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 PRDM8Q9NQV8 689 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 SIRT5Q9NXA8 310 aa16.36■□□□□ 0.21
SHKBP1-216ENST00000598201 MAGEA13PA6NCF6 341 aa16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 STK25O00506 426 aa16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 SOCS2O14508 198 aa16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 GSTA4O15217 222 aa16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 CALRP27797 417 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 TRPC1P48995 793 aa16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 TPMTP51580 245 aa16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 MICU2Q8IYU8 434 aa16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 ANKRD53Q8N9V6 530 aa16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 DUSP26Q9BV47 211 aa16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 VCXQ9H320 206 aa16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 FAM120CQ9NX05 1096 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 SCHIP1Q9P0W5 487 aaPredicted RBP16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 RAB26Q9ULW5 256 aa16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 NDRG2Q9UN36 371 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 PCDHGB4Q9UN71 923 aa16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 MRPS17Q9Y2R5 130 aaKnown RBP16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 TSC22D4Q9Y3Q8 395 aa16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 PCDHGB5Q9Y5G0 923 aa16.35■□□□□ 0.21
SHKBP1-216ENST00000598201 TCRBV21S2A2A0A5A6 115 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 ARHGAP10A1A4S6 786 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 PRSS38A1L453 326 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 FAM220BPB1ANY3 271 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 H7BY64 318 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 CPSF4O95639 269 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 ZCCHC18P0CG32 403 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 CCT8P50990 548 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 HNRNPFP52597 415 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 CCINQ13939 588 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 PDK3Q15120 406 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 TCEA2Q15560 299 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 ZNF385BQ569K4 471 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 CPTPQ5TA50 214 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 KRT78Q8N1N4 520 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 METTL4Q8N3J2 472 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 ABHD11Q8NFV4 315 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 ASB12Q8WXK4 309 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 UBE2E3Q969T4 207 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 FAM120BQ96EK7 910 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 PDXPQ96GD0 296 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 ZNF597Q96LX8 424 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 RNF145Q96MT1 663 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 PRAP1Q96NZ9 151 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 CHID1Q9BWS9 393 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 SORBS1Q9BX66 1292 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 PELI2Q9HAT8 420 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 WASH6PQ9NQA3 447 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 UBAP1Q9NZ09 502 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 DLGAP2Q9P1A6 1054 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 FEZF1A0PJY2 475 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 PDZK1P1A8MUH7 402 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 PDLIM1O00151 329 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 CXCR6O00574 342 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 GABRG2P18507 467 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 CYP4F2P78329 520 aa16.34■□□□□ 0.21
SHKBP1-216ENST00000598201 MC1RQ01726 317 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms