RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-205ENST00000597776 ACER2Q5QJU3 275 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 RBM20Q5T481 1227 aaKnown RBP9.93□□□□□ -0.82
LSM4-205ENST00000597776 CCDC137Q6PK04 289 aaKnown RBP9.93□□□□□ -0.82
LSM4-205ENST00000597776 AGTRAPQ6RW13 159 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 PAQR3Q6TCH7 311 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 ASPGQ86U10 573 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 SLC26A11Q86WA9 606 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 C17orf64Q86WR6 236 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 CRLF3Q8IUI8 442 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 MCEMP1Q8IX19 187 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 RASGEF1CQ8N431 466 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 NAT8LQ8N9F0 302 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.93□□□□□ -0.82
LSM4-205ENST00000597776 CAMKVQ8NCB2 501 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 OR5T3Q8NGG3 340 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 DNAJB8Q8NHS0 232 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 CALML6Q8TD86 181 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 MCOLN3Q8TDD5 553 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 TM4SF19Q96DZ7 209 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 SIGLEC12Q96PQ1 595 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 NPAS2Q99743 824 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 FAM167BQ9BTA0 163 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 TSPAN10Q9H1Z9 355 aaPredicted RBP9.93□□□□□ -0.82
LSM4-205ENST00000597776 KCNK13Q9HB14 408 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 ANKHQ9HCJ1 492 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 KLHL1Q9NR64 748 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 SLC17A6Q9P2U8 582 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 C19orf25Q9UFG5 118 aaPredicted RBP9.93□□□□□ -0.82
LSM4-205ENST00000597776 PPP2R2CQ9Y2T4 447 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 NAALAD2Q9Y3Q0 740 aa9.93□□□□□ -0.82
LSM4-205ENST00000597776 FAM227AF5H4B4 570 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 EIF3FO00303 357 aaPredicted RBP9.92□□□□□ -0.82
LSM4-205ENST00000597776 DNAJB6O75190 326 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 B3GALT4O96024 378 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 C8GP07360 202 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 CYC1P08574 325 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 GABRB3P28472 473 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 RGS4P49798 205 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 AGTR2P50052 363 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 MEF2AQ02078 507 aaPredicted RBP9.92□□□□□ -0.82
LSM4-205ENST00000597776 RHAGQ02094 409 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 ART3Q13508 389 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 TUBA3CQ13748 450 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 CRYMQ14894 314 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 CYP1B1Q16678 543 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 ZXDCQ2QGD7 858 aaPredicted RBP9.92□□□□□ -0.82
LSM4-205ENST00000597776 SFT2D3Q587I9 215 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 CAPN13Q6MZZ7 669 aaPredicted RBP9.92□□□□□ -0.82
LSM4-205ENST00000597776 H3F3CQ6NXT2 135 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 TUBA3EQ6PEY2 450 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 PAPD4Q6PIY7 484 aaKnown RBP9.92□□□□□ -0.82
LSM4-205ENST00000597776 MRGPRGQ86SM5 289 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 LRRC8AQ8IWT6 810 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 LMNTD2Q8IXW0 634 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 C2CD4AQ8NCU7 369 aaPredicted RBP9.92□□□□□ -0.82
LSM4-205ENST00000597776 MDS2Q8NDY4 140 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 SLC13A3Q8WWT9 602 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 TSLPQ969D9 159 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 PYCR2Q96C36 320 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 THAP11Q96EK4 314 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 MOCOSQ96EN8 888 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 LINGO1Q96FE5 620 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 PEX11GQ96HA9 241 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 ZNF354BQ96LW1 612 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 SGPP1Q9BX95 441 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 PCBD2Q9H0N5 130 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 PARVBQ9HBI1 364 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 LANCL2Q9NS86 450 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 SUCOQ9UBS9 1254 aaKnown RBP9.92□□□□□ -0.82
LSM4-205ENST00000597776 TINAGQ9UJW2 476 aa9.92□□□□□ -0.82
LSM4-205ENST00000597776 DCHS2Q6V1P9 2916 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 MYO7BQ6PIF6 2116 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 SCN3AQ9NY46 2000 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 PGRMC1O00264 195 aaKnown RBP9.91□□□□□ -0.82
LSM4-205ENST00000597776 NDUFS4O43181 175 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 ZNHIT1O43257 154 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 SLC19A2O60779 497 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 SERPIND1P05546 499 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 SNRPB2P08579 225 aaKnown RBP9.91□□□□□ -0.82
LSM4-205ENST00000597776 SLC35G6P0C7Q6 338 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 MYBL2P10244 700 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 NPPBP16860 134 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 PGAM1P18669 254 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 HTR1EP28566 365 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 CD96P40200 585 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 OLR1P78380 273 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 ACTN3Q08043 901 aaPredicted RBP9.91□□□□□ -0.82
LSM4-205ENST00000597776 DHX9Q08211 1270 aaKnown RBP9.91□□□□□ -0.82
LSM4-205ENST00000597776 SP140Q13342 867 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 NAA30Q147X3 362 aaPredicted RBP9.91□□□□□ -0.82
LSM4-205ENST00000597776 OR1C1Q15619 314 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 NSDHLQ15738 373 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 EXT1Q16394 746 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 C3AR1Q16581 482 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 RNASEH2BQ5TBB1 312 aaKnown RBP9.91□□□□□ -0.82
LSM4-205ENST00000597776 SPINK14Q6IE38 97 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 LRRC8EQ6NSJ5 796 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 UGT3A1Q6NUS8 523 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 PALM2Q8IXS6 379 aa9.91□□□□□ -0.82
LSM4-205ENST00000597776 PPIL6Q8IXY8 311 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms