RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 PEBP1P30086 187 aaKnown RBP11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 HMOX2P30519 316 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 CCR8P51685 355 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 RP1P56715 2156 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 OR1D5P58170 312 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 TRAF3Q13114 568 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 KCNAB2Q13303 367 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 HIST2H2ACQ16777 129 aaPredicted RBP11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 SLC5A12Q1EHB4 618 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 AMZ1Q400G9 498 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 PAGE2BQ5JRK9 111 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 LIPJQ5W064 366 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 ATG9BQ674R7 924 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 HIST2H2AA3Q6FI13 130 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 SPESP1Q6UW49 350 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 NXPE4Q6UWF7 544 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 SPRED1Q7Z699 444 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 RP1L1Q8IWN7 2480 aaPredicted RBP11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 HOMEZQ8IX15 550 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 KRT78Q8N1N4 520 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 TBC1D19Q8N5T2 526 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 ZNF781Q8N8C0 355 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 OR2L3Q8NG85 312 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 OR4F6Q8NGB9 312 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 OR2A1Q8NGT9 310 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 FAR2Q96K12 515 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 SORT1Q99523 831 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 EFCAB11Q9BUY7 163 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 NTMT1Q9BV86 223 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 SLC29A3Q9BZD2 475 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 EHD1Q9H4M9 534 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 SYNDIG1Q9H7V2 258 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 ZNF395Q9H8N7 513 aaPredicted RBP11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 PELI2Q9HAT8 420 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 SLCO1B3Q9NPD5 702 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 FGFR1OP2Q9NVK5 253 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 TRPS1Q9UHF7 1281 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 FIS1Q9Y3D6 152 aa11.56□□□□□ -0.56
SHKBP1-213ENST00000597325 A0A0J9YY10 115 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 A1L4Q6 167 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 EME2A4GXA9 379 aaPredicted RBP11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 GMNCA6NCL1 334 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 SLCO1B7G3V0H7 640 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 UBFD1O14562 309 aaKnown RBP11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 PRICKLE3O43900 615 aaPredicted RBP11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 SHOX2O60902 331 aaPredicted RBP11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 OR4F21O95013 312 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 C1GALT1C1LP0DN25 315 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 LIPCP11150 499 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 EPORP19235 508 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 CDH3P22223 829 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 CXCR2P25025 360 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 ARRB2P32121 409 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 GRK3P35626 688 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 HNF4AP41235 474 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 RPL14P50914 215 aaKnown RBP11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 HK2P52789 917 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 SH3BP2P78314 561 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 PRDX1Q06830 199 aaKnown RBP11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 LAPTM5Q13571 262 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 DOC2AQ14183 400 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 SLBPQ14493 270 aaKnown RBP eCLIP11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 TBCCQ15814 346 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 GGTA1PQ4G0N0 100 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 GRHL2Q6ISB3 625 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 LETMD1Q6P1Q0 360 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 RBM44Q6ZP01 1051 aaKnown RBP11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 SLCO4C1Q6ZQN7 724 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 PLXDC1Q8IUK5 500 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 WDR75Q8IWA0 830 aaKnown RBP11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 LRRC34Q8IZ02 419 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 CDYL2Q8N8U2 506 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 NCSTNQ92542 709 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 UBE2E3Q969T4 207 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 REPS1Q96D71 796 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 ZDHHC12Q96GR4 267 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 CDK15Q96Q40 435 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 OR2A14Q96R47 310 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 CD180Q99467 661 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 AIF1LQ9BQI0 150 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 CCDC3Q9BQI4 270 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 C20orf27Q9GZN8 174 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 FAM107BQ9H098 131 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 WDR70Q9NW82 654 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 MARCOQ9UEW3 520 aaPredicted RBP11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 POMT2Q9UKY4 750 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 SNX7Q9UNH6 387 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 SH2B3Q9UQQ2 575 aa11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 ARHGEF17Q96PE2 2063 aaPredicted RBP11.55□□□□□ -0.56
SHKBP1-213ENST00000597325 CCDC187A0A096LP49 1063 aa11.54□□□□□ -0.56
SHKBP1-213ENST00000597325 TLCD2A6NGC4 264 aa11.54□□□□□ -0.56
SHKBP1-213ENST00000597325 PPP6CO00743 305 aa11.54□□□□□ -0.56
SHKBP1-213ENST00000597325 AZIN1O14977 448 aa11.54□□□□□ -0.56
SHKBP1-213ENST00000597325 CASC3O15234 703 aaKnown RBP11.54□□□□□ -0.56
SHKBP1-213ENST00000597325 MAP3K7O43318 606 aa11.54□□□□□ -0.56
SHKBP1-213ENST00000597325 KRT6AP02538 564 aa11.54□□□□□ -0.56
SHKBP1-213ENST00000597325 KRT6BP04259 564 aa11.54□□□□□ -0.56
SHKBP1-213ENST00000597325 RPLP0P05388 317 aaKnown RBP11.54□□□□□ -0.56
SHKBP1-213ENST00000597325 CAPN1P07384 714 aa11.54□□□□□ -0.56
SHKBP1-213ENST00000597325 KITP10721 976 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms