RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 GRK5P34947 590 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 PIK3CBP42338 1070 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 RGS6P49758 472 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 CHIT1Q13231 466 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 PPIGQ13427 754 aaKnown RBP eCLIP12.78□□□□□ -0.362e-6■■■■□ 20.1
VRK3-209ENST00000594948 RGNQ15493 299 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 ARMCX4Q5H9R4 360 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 PRAMEF9Q5VWM5 478 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 DESI1Q6ICB0 168 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 TSEN54Q7Z6J9 526 aaKnown RBP12.78□□□□□ -0.36
VRK3-209ENST00000594948 GALNT10Q86SR1 603 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 CCDC190Q86UF4 302 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 NLRP8Q86W28 1048 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 MMAAQ8IVH4 418 aaKnown RBP12.78□□□□□ -0.36
VRK3-209ENST00000594948 CCDC103Q8IW40 242 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 CLECL1Q8IZS7 167 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 STX19Q8N4C7 294 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 SETD6Q8TBK2 473 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 WDR20Q8TBZ3 569 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 WBP2Q969T9 261 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 CASD1Q96PB1 797 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 FEVQ99581 238 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 CLSTN3Q9BQT9 956 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 C2orf49Q9BVC5 232 aaPredicted RBP12.78□□□□□ -0.36
VRK3-209ENST00000594948 CDCA4Q9BXL8 241 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 BRF2Q9HAW0 419 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 ZNF226Q9NYT6 803 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 VPS4AQ9UN37 437 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 PPIL1Q9Y3C6 166 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 GRIP1Q9Y3R0 1128 aa12.78□□□□□ -0.36
VRK3-209ENST00000594948 THSD7BQ9C0I4 1608 aa12.77□□□□□ -0.36
VRK3-209ENST00000594948 EFCAB10A6NFE3 127 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 MPZL2O60487 215 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 NBNO60934 754 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 IGSF6O95976 241 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 C1QCP02747 245 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 SPNP16150 400 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 ZNF24P17028 368 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 ITGA2P17301 1181 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 SEPHS1P49903 392 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 RBBP4Q09028 425 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 IFI44LQ53G44 452 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 SPANXN2Q5MJ10 180 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 AGAP6Q5VW22 663 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 CCBE1Q6UXH8 406 aaPredicted RBP12.77□□□□□ -0.37
VRK3-209ENST00000594948 TPRG1Q6ZUI0 275 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 NPAS3Q8IXF0 933 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 FAM217AQ8IXS0 508 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 GPR26Q8NDV2 337 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 TTC16Q8NEE8 873 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 FLCNQ8NFG4 579 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 COQ8BQ96D53 544 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 AGAP4Q96P64 663 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 DPH2Q9BQC3 489 aaPredicted RBP12.77□□□□□ -0.37
VRK3-209ENST00000594948 EBPLQ9BY08 206 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 TM6SF2Q9BZW4 377 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 RNF38Q9H0F5 515 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 RACGAP1Q9H0H5 632 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 SIAEQ9HAT2 523 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 NDUFAF4Q9P032 175 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 CRNNQ9UBG3 495 aaPredicted RBP12.77□□□□□ -0.37
VRK3-209ENST00000594948 SLC22A14Q9Y267 594 aa12.77□□□□□ -0.37
VRK3-209ENST00000594948 KIF26AQ9ULI4 1882 aaPredicted RBP12.77□□□□□ -0.37
VRK3-209ENST00000594948 H0YIV9 168 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 TLL1O43897 1013 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 CELF2O95319 508 aaKnown RBP12.76□□□□□ -0.37
VRK3-209ENST00000594948 PARNO95453 639 aaKnown RBP12.76□□□□□ -0.37
VRK3-209ENST00000594948 LAMP1P11279 417 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 SERPINA4P29622 427 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 TIE1P35590 1138 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 HNF4AP41235 474 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 PFN3P60673 137 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 B4GALNT1Q00973 533 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 ACSM2AQ08AH3 577 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 MICAQ29983 383 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 CPTPQ5TA50 214 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 ACSM2BQ68CK6 577 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 GRHL2Q6ISB3 625 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 GDPD3Q7L5L3 318 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 SLC5A8Q8N695 610 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 IL17RDQ8NFM7 739 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 GOT1L1Q8NHS2 421 aaPredicted RBP12.76□□□□□ -0.37
VRK3-209ENST00000594948 YIPF2Q9BWQ6 316 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 C3orf14Q9HBI5 128 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 BACE2Q9Y5Z0 518 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 ARRDC5A6NEK1 342 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 K7ERQ8 282 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 RNASET2O00584 256 aaKnown RBP12.76□□□□□ -0.37
VRK3-209ENST00000594948 KMOO15229 486 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 YY2O15391 372 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 GCM2O75603 506 aaPredicted RBP12.76□□□□□ -0.37
VRK3-209ENST00000594948 STSP08842 583 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 PIPP12273 146 aaPredicted RBP12.76□□□□□ -0.37
VRK3-209ENST00000594948 ALOX12P18054 663 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 GTF2E2P29084 291 aaKnown RBP12.76□□□□□ -0.37
VRK3-209ENST00000594948 IFITM2Q01629 132 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 IRF8Q02556 426 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 FCHO2Q0JRZ9 810 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 CDH18Q13634 790 aa12.76□□□□□ -0.37
VRK3-209ENST00000594948 ZNF544Q6NX49 715 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms