RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 POC5Q8NA72 575 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 DNASE1L2Q92874 299 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 SCAMP4Q969E2 229 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 SLC38A4Q969I6 547 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 ECHDC3Q96DC8 303 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 KCNC2Q96PR1 638 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 DUSP26Q9BV47 211 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 HOXD1Q9GZZ0 328 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 EPS8L2Q9H6S3 715 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 BRD9Q9H8M2 597 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 PRDM8Q9NQV8 689 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 PCDHB11Q9Y5F2 797 aa15.92■□□□□ 0.14
LIG1-206ENST00000594067 AGAP5A6NIR3 686 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 TAF4O00268 1085 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 SNPHO15079 494 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 OLFM2O95897 454 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 C9P02748 559 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 ACPPP15309 386 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 CLK1P49759 484 aaKnown RBP15.91■□□□□ 0.14
LIG1-206ENST00000594067 CRYBA2P53672 197 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 TUBA1BP68363 451 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 IFITM2Q01629 132 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 ACSM2AQ08AH3 577 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 DOC2AQ14183 400 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 ZNF181Q2M3W8 571 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 PROX2Q3B8N5 592 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 IQCCQ4KMZ1 466 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 MPPE1Q53F39 396 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 ACSM2BQ68CK6 577 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 FAHD1Q6P587 224 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 C22orf39Q6P5X5 142 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 DPY19L3Q6ZPD9 716 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 TUBA1AQ71U36 451 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 OR8J2Q8NGG1 315 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 FIBINQ8TAL6 211 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 WDR20Q8TBZ3 569 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 C7orf34Q96L11 122 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 RUBCNLQ9H714 662 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 MRPL17Q9NRX2 175 aaKnown RBP15.91■□□□□ 0.14
LIG1-206ENST00000594067 ETHE1O95571 254 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 GJA1P17302 382 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 RRM2P31350 389 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 UGT2B10P36537 528 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 CASP9P55211 416 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 AP1S2P56377 157 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 PRSS36Q5K4E3 855 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 PLEKHS1Q5SXH7 462 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 TUBA3EQ6PEY2 450 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 THOC6Q86W42 341 aaKnown RBP15.91■□□□□ 0.14
LIG1-206ENST00000594067 RAET1EQ8TD07 263 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 IPCEF1Q8WWN9 437 aaPredicted RBP15.91■□□□□ 0.14
LIG1-206ENST00000594067 MCCC1Q96RQ3 725 aaPredicted RBP15.91■□□□□ 0.14
LIG1-206ENST00000594067 ITPAQ9BY32 194 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 TESMINQ9Y4I5 508 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 SERTM1A2A2V5 107 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 OR2AG2A6NM03 316 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 GABRR3A8MPY1 467 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 PRMT3O60678 531 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 SPNP16150 400 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 NKX2-5P52952 324 aaPredicted RBP15.91■□□□□ 0.14
LIG1-206ENST00000594067 KCNJ10P78508 379 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 CSTF3Q12996 717 aaKnown RBP15.91■□□□□ 0.14
LIG1-206ENST00000594067 SP140Q13342 867 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 HKDC1Q2TB90 917 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 LIPJQ5W064 366 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 CHST14Q8NCH0 376 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 FAM83FQ8NEG4 500 aaPredicted RBP15.91■□□□□ 0.14
LIG1-206ENST00000594067 MED8Q96G25 268 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 SMG9Q9H0W8 520 aaKnown RBP15.91■□□□□ 0.14
LIG1-206ENST00000594067 AMBNQ9NP70 447 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.91■□□□□ 0.142e-6■□□□□ 8.3
LIG1-206ENST00000594067 RNF6Q9Y252 685 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 RUVBL1Q9Y265 456 aaKnown RBP15.91■□□□□ 0.14
LIG1-206ENST00000594067 PCDHGA6Q9Y5G7 932 aa15.91■□□□□ 0.14
LIG1-206ENST00000594067 CASP8AP2Q9UKL3 1982 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 PLXNB3Q9ULL4 1909 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 TMEM202A6NGA9 273 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 SAGE2PA6NJ88 616 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 M0R082 166 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 SLC16A5O15375 505 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 AIREO43918 545 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 ABCB1P08183 1280 aaPredicted RBP15.9■□□□□ 0.14
LIG1-206ENST00000594067 TNFRSF1BP20333 461 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 NAE1Q13564 534 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 PITX2Q99697 317 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 TMEM184CQ9NVA4 438 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 PPIL1Q9Y3C6 166 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 FAM47E-STBD1D6RA91 191 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 PSMD11O00231 422 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 NRG2O14511 850 aaPredicted RBP15.9■□□□□ 0.14
LIG1-206ENST00000594067 SCAMP2O15127 329 aaKnown RBP15.9■□□□□ 0.14
LIG1-206ENST00000594067 SUV39H1O43463 412 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 DLGAP3O95886 979 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 PTPN2P17706 415 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 HLA-FP30511 346 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 GAB1Q13480 694 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 RAB33AQ14088 237 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 VEZF1Q14119 521 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 CCSMST1Q4G0I0 132 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms