RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 RBM20Q5T481 1227 aaKnown RBP19.32■□□□□ 0.68
TRIM47-207ENST00000593089 RNASEH2BQ5TBB1 312 aaKnown RBP19.32■□□□□ 0.68
TRIM47-207ENST00000593089 PLAG1Q6DJT9 500 aa19.32■□□□□ 0.68
TRIM47-207ENST00000593089 CAPN13Q6MZZ7 669 aaPredicted RBP19.32■□□□□ 0.68
TRIM47-207ENST00000593089 LCTLQ6UWM7 567 aa19.32■□□□□ 0.68
TRIM47-207ENST00000593089 PDSS2Q86YH6 399 aa19.32■□□□□ 0.68
TRIM47-207ENST00000593089 TICAM1Q8IUC6 712 aa19.32■□□□□ 0.68
TRIM47-207ENST00000593089 GRK7Q8WTQ7 553 aa19.32■□□□□ 0.68
TRIM47-207ENST00000593089 SLC13A3Q8WWT9 602 aa19.32■□□□□ 0.68
TRIM47-207ENST00000593089 MARVELD3Q96A59 401 aa19.32■□□□□ 0.68
TRIM47-207ENST00000593089 LINGO1Q96FE5 620 aa19.32■□□□□ 0.68
TRIM47-207ENST00000593089 RBCK1Q9BYM8 510 aa19.32■□□□□ 0.68
TRIM47-207ENST00000593089 ABI3Q9P2A4 366 aa19.32■□□□□ 0.68
TRIM47-207ENST00000593089 COPG2Q9UBF2 871 aa19.32■□□□□ 0.68
TRIM47-207ENST00000593089 SEC14L3Q9UDX4 400 aa19.32■□□□□ 0.68
TRIM47-207ENST00000593089 NAALAD2Q9Y3Q0 740 aa19.32■□□□□ 0.68
TRIM47-207ENST00000593089 CREBBPQ92793 2442 aa19.32■□□□□ 0.68
TRIM47-207ENST00000593089 CYC1P08574 325 aa19.31■□□□□ 0.68
TRIM47-207ENST00000593089 MYBL2P10244 700 aa19.31■□□□□ 0.68
TRIM47-207ENST00000593089 CCND1P24385 295 aa19.31■□□□□ 0.68
TRIM47-207ENST00000593089 GABRB3P28472 473 aa19.31■□□□□ 0.68
TRIM47-207ENST00000593089 GRK3P35626 688 aa19.31■□□□□ 0.68
TRIM47-207ENST00000593089 AGTR2P50052 363 aa19.31■□□□□ 0.68
TRIM47-207ENST00000593089 ST13P50502 369 aaKnown RBP19.31■□□□□ 0.68
TRIM47-207ENST00000593089 CDKN2DP55273 166 aa19.31■□□□□ 0.68
TRIM47-207ENST00000593089 PPP1R7Q15435 360 aa19.31■□□□□ 0.68
TRIM47-207ENST00000593089 PHKG1Q16816 387 aa19.31■□□□□ 0.68
TRIM47-207ENST00000593089 SP5Q6BEB4 398 aaPredicted RBP19.31■□□□□ 0.68
TRIM47-207ENST00000593089 TMEM207Q6UWW9 146 aa19.31■□□□□ 0.68
TRIM47-207ENST00000593089 SRRM1Q8IYB3 904 aaKnown RBP19.31■□□□□ 0.68
TRIM47-207ENST00000593089 BEST3Q8N1M1 668 aa19.31■□□□□ 0.68
TRIM47-207ENST00000593089 DNAJB8Q8NHS0 232 aa19.31■□□□□ 0.68
TRIM47-207ENST00000593089 ZNF354BQ96LW1 612 aa19.31■□□□□ 0.68
TRIM47-207ENST00000593089 SGPP1Q9BX95 441 aa19.31■□□□□ 0.68
TRIM47-207ENST00000593089 KCNK13Q9HB14 408 aa19.31■□□□□ 0.68
TRIM47-207ENST00000593089 ENTPD4Q9Y227 616 aa19.31■□□□□ 0.68
TRIM47-207ENST00000593089 MYO7BQ6PIF6 2116 aa19.3■□□□□ 0.68
TRIM47-207ENST00000593089 ZNF860A6NHJ4 632 aa19.3■□□□□ 0.68
TRIM47-207ENST00000593089 SLC16A5O15375 505 aa19.3■□□□□ 0.68
TRIM47-207ENST00000593089 HNRNPRO43390 633 aaKnown RBP19.3■□□□□ 0.68
TRIM47-207ENST00000593089 CDC123O75794 336 aaPredicted RBP19.3■□□□□ 0.68
TRIM47-207ENST00000593089 HIST1H2AGP0C0S8 130 aaPredicted RBP19.3■□□□□ 0.68
TRIM47-207ENST00000593089 SLC35G6P0C7Q6 338 aa19.3■□□□□ 0.68
TRIM47-207ENST00000593089 NPPBP16860 134 aa19.3■□□□□ 0.68
TRIM47-207ENST00000593089 HIST1H2ADP20671 130 aa19.3■□□□□ 0.68
TRIM47-207ENST00000593089 FNTAP49354 379 aa19.3■□□□□ 0.68
TRIM47-207ENST00000593089 MEF2AQ02078 507 aaPredicted RBP19.3■□□□□ 0.68
TRIM47-207ENST00000593089 DHX9Q08211 1270 aaKnown RBP19.3■□□□□ 0.68
TRIM47-207ENST00000593089 ZNF766Q5HY98 468 aa19.3■□□□□ 0.68
TRIM47-207ENST00000593089 ACER2Q5QJU3 275 aa19.3■□□□□ 0.68
TRIM47-207ENST00000593089 MFSD9Q8NBP5 474 aa19.3■□□□□ 0.68
TRIM47-207ENST00000593089 GABPB2Q8TAK5 448 aaPredicted RBP19.3■□□□□ 0.68
TRIM47-207ENST00000593089 PYCR2Q96C36 320 aa19.3■□□□□ 0.68
TRIM47-207ENST00000593089 PEX11GQ96HA9 241 aa19.3■□□□□ 0.68
TRIM47-207ENST00000593089 HIST1H2AHQ96KK5 128 aa19.3■□□□□ 0.68
TRIM47-207ENST00000593089 HIST1H2AJQ99878 128 aa19.3■□□□□ 0.68
TRIM47-207ENST00000593089 H2AFJQ9BTM1 129 aa19.3■□□□□ 0.68
TRIM47-207ENST00000593089 SLC17A6Q9P2U8 582 aa19.3■□□□□ 0.68
TRIM47-207ENST00000593089 SH3BGRL2Q9UJC5 107 aa19.3■□□□□ 0.68
TRIM47-207ENST00000593089 GOLGA6L10A0A0M3HER8 536 aa19.29■□□□□ 0.68
TRIM47-207ENST00000593089 PABPN1LA6NDY0 278 aaKnown RBP19.29■□□□□ 0.68
TRIM47-207ENST00000593089 AHSGP02765 367 aa19.29■□□□□ 0.68
TRIM47-207ENST00000593089 PGGT1BP53609 377 aa19.29■□□□□ 0.68
TRIM47-207ENST00000593089 SFT2D3Q587I9 215 aa19.29■□□□□ 0.68
TRIM47-207ENST00000593089 SPANXN3Q5MJ09 141 aa19.29■□□□□ 0.68
TRIM47-207ENST00000593089 H3F3CQ6NXT2 135 aa19.29■□□□□ 0.68
TRIM47-207ENST00000593089 CRLF3Q8IUI8 442 aa19.29■□□□□ 0.68
TRIM47-207ENST00000593089 OR5T3Q8NGG3 340 aa19.29■□□□□ 0.68
TRIM47-207ENST00000593089 ACTRT1Q8TDG2 376 aa19.29■□□□□ 0.68
TRIM47-207ENST00000593089 OSBPL9Q96SU4 736 aa19.29■□□□□ 0.68
TRIM47-207ENST00000593089 HAUS8Q9BT25 410 aa19.29■□□□□ 0.68
TRIM47-207ENST00000593089 FAM129AQ9BZQ8 928 aa19.29■□□□□ 0.68
TRIM47-207ENST00000593089 ANKRD10Q9NXR5 420 aa19.29■□□□□ 0.68
TRIM47-207ENST00000593089 ARL15Q9NXU5 204 aa19.29■□□□□ 0.68
TRIM47-207ENST00000593089 SUCOQ9UBS9 1254 aaKnown RBP19.29■□□□□ 0.68
TRIM47-207ENST00000593089 ASIC3Q9UHC3 531 aa19.29■□□□□ 0.68
TRIM47-207ENST00000593089 SLC22A7Q9Y694 548 aa19.29■□□□□ 0.68
TRIM47-207ENST00000593089 CCL21O00585 134 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 DNALI1O14645 258 aaPredicted RBP19.28■□□□□ 0.68
TRIM47-207ENST00000593089 NDUFS4O43181 175 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 OR1F1O43749 312 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 TTC4O95801 387 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 SERPIND1P05546 499 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 PRF1P14222 555 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 TNFRSF8P28908 595 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 RHAGQ02094 409 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 ACTN3Q08043 901 aaPredicted RBP19.28■□□□□ 0.68
TRIM47-207ENST00000593089 PDAP1Q13442 181 aaKnown RBP19.28■□□□□ 0.68
TRIM47-207ENST00000593089 TUBA3CQ13748 450 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 ABRAXAS2Q15018 415 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 NSDHLQ15738 373 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 EXT1Q16394 746 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 MEP1AQ16819 746 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 ZXDCQ2QGD7 858 aaPredicted RBP19.28■□□□□ 0.68
TRIM47-207ENST00000593089 MSS51Q4VC12 460 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 TUBA3EQ6PEY2 450 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 PAPD4Q6PIY7 484 aaKnown RBP19.28■□□□□ 0.68
TRIM47-207ENST00000593089 PCGF5Q86SE9 256 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 SLC35F6Q8N357 371 aa19.28■□□□□ 0.68
TRIM47-207ENST00000593089 M1APQ8TC57 530 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms