RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 ANGPTL6Q8NI99 470 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 EXOC6Q8TAG9 804 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 RNF139Q8WU17 664 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 PDCD6IPQ8WUM4 868 aaKnown RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 HEXDCQ8WVB3 486 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 NELFBQ8WX92 580 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 STARD8Q92502 1023 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 PHF21AQ96BD5 680 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 LINGO1Q96FE5 620 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 FAM111AQ96PZ2 611 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 TXN2Q99757 166 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 C1QTNF1Q9BXJ1 281 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 MTMR12Q9C0I1 747 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 RAB6CQ9H0N0 254 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 C2orf40Q9H1Z8 148 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 TPK1Q9H3S4 243 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 THAP9Q9H5L6 903 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 TRIM45Q9H8W5 580 aaPredicted RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 KCNK13Q9HB14 408 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 LY9Q9HBG7 655 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 NEK6Q9HC98 313 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 PALMDQ9NP74 551 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 RHBDL2Q9NX52 303 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 PAQR5Q9NXK6 330 aaPredicted RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 GDAP2Q9NXN4 497 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 TAS2R7Q9NYW3 318 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 IL37Q9NZH6 218 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 DBF4Q9UBU7 674 aaPredicted RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 ADD3Q9UEY8 706 aaKnown RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 IL19Q9UHD0 177 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 TSPYL4Q9UJ04 414 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 FAF1Q9UNN5 650 aaPredicted RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 FAM32AQ9Y421 112 aaKnown RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 ZFP37Q9Y6Q3 630 aaPredicted RBP3.3□□□□□ -1.88
VMP1-212ENST00000591782 KIF21AQ7Z4S6 1674 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 TOP2BQ02880 1626 aa3.3□□□□□ -1.88
VMP1-212ENST00000591782 MED1Q15648 1581 aaPredicted RBP3.29□□□□□ -1.88
VMP1-212ENST00000591782 WRNQ14191 1432 aaPredicted RBP eCLIP3.29□□□□□ -1.88
VMP1-212ENST00000591782 ERBINQ96RT1 1412 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 ANKRD36BQ8N2N9 1353 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 A0A1W2PQ09 198 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 GSTTP1A0A1W2PQM5 241 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 HEATR9A2RTY3 570 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 RGSL1A5PLK6 1076 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 OR5K4A6NMS3 321 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 CENPBD1B2RD01 187 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 TMEM114B3SHH9 223 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 TMEM189-UBE2V1I3L0A0 370 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 J3QR06 171 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 HDAC3O15379 428 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 SSX5O60225 188 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 STX10O60499 249 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 PEX11AO75192 247 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 SUPT3HO75486 399 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 CRYZL1O95825 349 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 IGLV2-11P01706 119 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 ATP1A1P05023 1023 aaKnown RBP3.29□□□□□ -1.88
VMP1-212ENST00000591782 KRT3P12035 628 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 SYT1P21579 422 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 MARK3P27448 753 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 GCH1P30793 250 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 IFNA8P32881 189 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 PPP1R2P41236 205 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 HNMTP50135 292 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 CCR3P51677 355 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 MFAP4P55083 255 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 MRPS5P82675 430 aaKnown RBP3.29□□□□□ -1.88
VMP1-212ENST00000591782 PPP2R2BQ00005 443 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 YWHAHQ04917 246 aaPredicted RBP3.29□□□□□ -1.88
VMP1-212ENST00000591782 FCHO2Q0JRZ9 810 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 SMARCB1Q12824 385 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 UBE2V1Q13404 147 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 CAMK2DQ13557 499 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 DLG2Q15700 870 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 MEP1AQ16819 746 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 SIRPB2Q5JXA9 342 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 CLVS2Q5SYC1 327 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 C12orf60Q5U649 245 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 PPP1R2P3Q6NXS1 205 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 GDPD4Q6W3E5 623 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 ZNF852Q6ZMS4 543 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 TPGS1Q6ZTW0 290 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 TPRG1Q6ZUI0 275 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 C15orf52Q6ZUT6 534 aaKnown RBP3.29□□□□□ -1.88
VMP1-212ENST00000591782 ZNF534Q76KX8 674 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 NUP54Q7Z3B4 507 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 TAF8Q7Z7C8 310 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 CUZD1Q86UP6 607 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 LONP2Q86WA8 852 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 CROCCP3Q8IVE0 287 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 ARID3BQ8IVW6 561 aaPredicted RBP3.29□□□□□ -1.88
VMP1-212ENST00000591782 MCEMP1Q8IX19 187 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 CDH26Q8IXH8 852 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 C17orf53Q8N3J3 647 aaPredicted RBP3.29□□□□□ -1.88
VMP1-212ENST00000591782 TBC1D19Q8N5T2 526 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 GCSAMQ8N6F7 178 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 RBM15BQ8NDT2 890 aaKnown RBP3.29□□□□□ -1.88
VMP1-212ENST00000591782 STKLD1Q8NE28 680 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 GMCL1P1Q8NEA9 526 aa3.29□□□□□ -1.88
VMP1-212ENST00000591782 DDHD1Q8NEL9 900 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms