RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 MPP5Q8N3R9 675 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 MREGQ8N565 214 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 C2orf73Q8N5S3 287 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-226ENST00000591534 LINC01555Q8NAE3 123 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 OR13J1Q8NGT2 312 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 HMGCLL1Q8TB92 370 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 MVB12AQ96EY5 273 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 ZNF285Q96NJ3 590 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 SLX1AQ9BQ83 275 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 ANKZF1Q9H8Y5 726 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 CHST11Q9NPF2 352 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 CATSPERZQ9NTU4 200 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 C14orf105Q9NVL8 296 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 RIC8BQ9NVN3 520 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 CTSFQ9UBX1 484 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 ZC3H7BQ9UGR2 993 aaKnown RBP8.99□□□□□ -0.97
BRCA1-226ENST00000591534 TEKT2Q9UIF3 430 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 C3orf18Q9UK00 162 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 NTNG1Q9Y2I2 539 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 KLHL20Q9Y2M5 609 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 KLK4Q9Y5K2 254 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 ITPR2Q14571 2701 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 CRYBG3Q68DQ2 2970 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 SHANK1Q9Y566 2161 aa8.99□□□□□ -0.97
BRCA1-226ENST00000591534 MED13Q9UHV7 2174 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 ARHGAP10A1A4S6 786 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 ZNF839A8K0R7 811 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 H3BMM5 538 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 CCNDBP1O95273 360 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 BMP10O95393 424 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 TTC4O95801 387 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 MLYCDO95822 493 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 EIF2S1P05198 315 aaKnown RBP8.98□□□□□ -0.97
BRCA1-226ENST00000591534 SERPINA7P05543 415 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 ANXA5P08758 320 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 PKMP14618 531 aaKnown RBP8.98□□□□□ -0.97
BRCA1-226ENST00000591534 H2AFXP16104 143 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-226ENST00000591534 FBLP22087 321 aaKnown RBP8.98□□□□□ -0.97
BRCA1-226ENST00000591534 HSD17B2P37059 387 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 MAGEA6P43360 314 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 KCNJ1P48048 391 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 EMP2P54851 167 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 PLTPP55058 493 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 BASP1P80723 227 aaKnown RBP8.98□□□□□ -0.97
BRCA1-226ENST00000591534 ACVR1Q04771 509 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 KLC1Q07866 573 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 ART3Q13508 389 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 LONRF1Q17RB8 773 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 TAX1BP1Q86VP1 789 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 FJX1Q86VR8 437 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 TRIM42Q8IWZ5 723 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 FAM20CQ8IXL6 584 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 DNAJB8Q8NHS0 232 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 STT3BQ8TCJ2 826 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 ANKRD7Q92527 254 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 HAS2Q92819 552 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 RELTQ969Z4 430 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 RERGQ96A58 199 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-226ENST00000591534 CABS1Q96KC9 395 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 ZNF778Q96MU6 729 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 MIPEPQ99797 713 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 ZFYVE21Q9BQ24 234 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 MENTQ9BUN1 341 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 YIPF2Q9BWQ6 316 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.98□□□□□ -0.97
BRCA1-226ENST00000591534 ZNF160Q9HCG1 818 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 SPATA7Q9P0W8 599 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 TCAF1Q9Y4C2 921 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 KLF2Q9Y5W3 355 aaPredicted RBP8.98□□□□□ -0.97
BRCA1-226ENST00000591534 MAU2Q9Y6X3 613 aa8.98□□□□□ -0.97
BRCA1-226ENST00000591534 A0A0J9YVX5 310 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 MASP2O00187 686 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 E2F3O00716 465 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 CD3EAPO15446 510 aaKnown RBP8.97□□□□□ -0.97
BRCA1-226ENST00000591534 ZG16O60844 167 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 ALOX12BO75342 701 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 C1orf105O95561 183 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 HEXBP07686 556 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 APRTP07741 180 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 PRR35P0CG20 571 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 NID1P14543 1247 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 RPA3P35244 121 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-226ENST00000591534 RPL22P35268 128 aaKnown RBP8.97□□□□□ -0.97
BRCA1-226ENST00000591534 PTGER4P35408 488 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 TNFSF10P50591 281 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 FOXL2P58012 376 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 SETDB1Q15047 1291 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 ANKRD20A4Q4UJ75 823 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 PCID2Q5JVF3 399 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 RNF187Q5TA31 235 aaPredicted RBP8.97□□□□□ -0.97
BRCA1-226ENST00000591534 GARNL3Q5VVW2 1013 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 ATG9BQ674R7 924 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 MRNIPQ6NTE8 343 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 TTC27Q6P3X3 843 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 TMEM207Q6UWW9 146 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 GFRALQ6UXV0 394 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 RPTNQ6XPR3 784 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 COX15Q7KZN9 410 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 VRK3Q8IV63 474 aa8.97□□□□□ -0.97
BRCA1-226ENST00000591534 METTL27Q8N6F8 245 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms