RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 ZNF382Q96SR6 550 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 CTRCQ99895 268 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 CENPKQ9BS16 269 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 SPRTNQ9H040 489 aaPredicted RBP8.66□□□□□ -1.02
CIRBP-218ENST00000588344 ACTR5Q9H9F9 607 aaPredicted RBP8.66□□□□□ -1.02
CIRBP-218ENST00000588344 APMAPQ9HDC9 416 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 NMRK1Q9NWW6 199 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 TRPS1Q9UHF7 1281 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 SNX6Q9UNH7 406 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 ASB1Q9Y576 335 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 SLC22A7Q9Y694 548 aa8.66□□□□□ -1.02
CIRBP-218ENST00000588344 RP1P56715 2156 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 SPTBN4Q9H254 2564 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 LOC105369274A0A096LPK9 316 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 LOC102723532A0A0G2JNH3 316 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 TMEM120BA0PK00 339 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 AGRPO00253 132 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 MEN1O00255 615 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 OR7A17O14581 309 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 DSCR3O14972 297 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 RRP8O43159 456 aaKnown RBP8.65□□□□□ -1.02
CIRBP-218ENST00000588344 NDUFS4O43181 175 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 KIAA0754O94854 1291 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 ESRRBO95718 433 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 DLGAP3O95886 979 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 ONECUT2O95948 504 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 KRT6AP02538 564 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 KRT6BP04259 564 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 ENO1P06733 434 aaKnown RBP8.65□□□□□ -1.02
CIRBP-218ENST00000588344 LIPCP11150 499 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 NEFHP12036 1026 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 CREB1P16220 341 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 ALAS2P22557 587 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 PTX3P26022 381 aaPredicted RBP8.65□□□□□ -1.02
CIRBP-218ENST00000588344 VARSP26640 1264 aaKnown RBP8.65□□□□□ -1.02
CIRBP-218ENST00000588344 ALDH3A1P30838 453 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 ARL1P40616 181 aaPredicted RBP8.65□□□□□ -1.02
CIRBP-218ENST00000588344 TSFMP43897 325 aaKnown RBP8.65□□□□□ -1.02
CIRBP-218ENST00000588344 KRT6CP48668 564 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 ATP1A2P50993 1020 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 ARFIP1P53367 373 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 DCDP81605 110 aaKnown RBP8.65□□□□□ -1.02
CIRBP-218ENST00000588344 HERC3Q15034 1050 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 HHATQ5VTY9 493 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 TTC19Q6DKK2 380 aaPredicted RBP8.65□□□□□ -1.02
CIRBP-218ENST00000588344 FRMPD2BQ6IN97 320 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 FRMD7Q6ZUT3 714 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 GPRIN3Q6ZVF9 776 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 CHSY3Q70JA7 882 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 ABHD13Q7L211 337 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 MYLK4Q86YV6 388 aaPredicted RBP8.65□□□□□ -1.02
CIRBP-218ENST00000588344 OR4N4Q8N0Y3 316 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 OR7G3Q8NG95 312 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 PPP1R14CQ8TAE6 165 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 TRPC4APQ8TEL6 797 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 GPR87Q9BY21 358 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 SLC29A3Q9BZD2 475 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 MED4Q9NPJ6 270 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 SEMA4BQ9NPR2 832 aaPredicted RBP8.65□□□□□ -1.02
CIRBP-218ENST00000588344 CUTCQ9NTM9 273 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 SLC17A7Q9P2U7 560 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 ZNF490Q9ULM2 529 aaPredicted RBP8.65□□□□□ -1.02
CIRBP-218ENST00000588344 PPT2Q9UMR5 302 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 SH2B3Q9UQQ2 575 aa8.65□□□□□ -1.02
CIRBP-218ENST00000588344 A0A1B0GX78 115 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 LRIT2A6NDA9 550 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 LRRC14BA6NHZ5 514 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 C21orf140B9A014 251 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 H0YIG0 161 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 HCRTR1O43613 425 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 RAD1O60671 282 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 PRAMEF4O60810 478 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 ALBP02768 609 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 NTRK1P04629 796 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 RAB40ALP0C0E4 278 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 DHRS4L1P0CG22 281 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 IL10P22301 178 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 RORAP35398 523 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 GCGRP47871 477 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 AVPR1BP47901 424 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 SERPINB4P48594 390 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 CDH13P55290 713 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 MEF2AQ02078 507 aaPredicted RBP8.64□□□□□ -1.03
CIRBP-218ENST00000588344 IFT88Q13099 833 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 PCLAFQ15004 111 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 CPSF6Q16630 551 aaKnown RBP eCLIP8.64□□□□□ -1.03
CIRBP-218ENST00000588344 DEFB110Q30KQ9 67 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 PRAMEF9Q5VWM5 478 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 TMEM214Q6NUQ4 689 aaKnown RBP8.64□□□□□ -1.03
CIRBP-218ENST00000588344 UNQ6494/PRO21346Q6UXR6 183 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 ZNF517Q6ZMY9 492 aaPredicted RBP8.64□□□□□ -1.03
CIRBP-218ENST00000588344 VN1R4Q7Z5H5 301 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 DTX1Q86Y01 620 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 PLD3Q8IV08 490 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 CACNA2D3Q8IZS8 1091 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 DSELQ8IZU8 1212 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 ANKRD53Q8N9V6 530 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 ZNF740Q8NDX6 193 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 OR4F6Q8NGB9 312 aa8.64□□□□□ -1.03
CIRBP-218ENST00000588344 RAB3IL1Q8TBN0 382 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms