RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 ANKHQ9HCJ1 492 aa9.61□□□□□ -0.87
TPM4-207ENST00000588032 MKKSQ9NPJ1 570 aaPredicted RBP9.61□□□□□ -0.87
TPM4-207ENST00000588032 ACSS2Q9NR19 701 aa9.61□□□□□ -0.87
TPM4-207ENST00000588032 SEMA3GQ9NS98 782 aa9.61□□□□□ -0.87
TPM4-207ENST00000588032 C14orf105Q9NVL8 296 aa9.61□□□□□ -0.87
TPM4-207ENST00000588032 TMCO1Q9UM00 188 aa9.61□□□□□ -0.87
TPM4-207ENST00000588032 G3BP2Q9UN86 482 aaKnown RBP9.61□□□□□ -0.87
TPM4-207ENST00000588032 MAP4K5Q9Y4K4 846 aa9.61□□□□□ -0.87
TPM4-207ENST00000588032 MAU2Q9Y6X3 613 aa9.61□□□□□ -0.87
TPM4-207ENST00000588032 SNRNP200O75643 2136 aaKnown RBP9.61□□□□□ -0.87
TPM4-207ENST00000588032 WDFY3Q8IZQ1 3526 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 A0A0A6YYC8 382 aaPredicted RBP9.6□□□□□ -0.87
TPM4-207ENST00000588032 IQANK1A0A1B0GTG1 560 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 TRIM49D1C9J1S8 452 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 I3L1I5 382 aaPredicted RBP9.6□□□□□ -0.87
TPM4-207ENST00000588032 P2RX6O15547 441 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 NDUFS4O43181 175 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 FOXS1O43638 330 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 KLK8O60259 260 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 CCNT2O60583 730 aaKnown RBP9.6□□□□□ -0.87
TPM4-207ENST00000588032 KLHL41O60662 606 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 CNOT3O75175 753 aaKnown RBP9.6□□□□□ -0.87
TPM4-207ENST00000588032 SLU7O95391 586 aaKnown RBP9.6□□□□□ -0.87
TPM4-207ENST00000588032 MED26O95402 600 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 CYC1P08574 325 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 ZGLP1P0C6A0 271 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 PYGBP11216 843 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 MTHFD2P13995 350 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 IL10P22301 178 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 OTX2P32243 289 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 HPDP32754 393 aaPredicted RBP9.6□□□□□ -0.87
TPM4-207ENST00000588032 HSPA7P48741 367 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 ALDH18A1P54886 795 aaKnown RBP9.6□□□□□ -0.87
TPM4-207ENST00000588032 IRF9Q00978 393 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 MEF2AQ02078 507 aaPredicted RBP9.6□□□□□ -0.87
TPM4-207ENST00000588032 PCDH1Q08174 1060 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 C19orf57Q0VDD7 668 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 HERC3Q15034 1050 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 RBBP5Q15291 538 aaKnown RBP9.6□□□□□ -0.87
TPM4-207ENST00000588032 TBCCQ15814 346 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 PDK4Q16654 411 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 C18orf21Q32NC0 220 aaPredicted RBP9.6□□□□□ -0.87
TPM4-207ENST00000588032 PAGE2BQ5JRK9 111 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 TMIGD1Q6UXZ0 262 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 METTL27Q8N6F8 245 aaPredicted RBP9.6□□□□□ -0.87
TPM4-207ENST00000588032 SNX31Q8N9S9 440 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 UHMK1Q8TAS1 419 aaKnown RBP9.6□□□□□ -0.87
TPM4-207ENST00000588032 STT3BQ8TCJ2 826 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 UBTD2Q8WUN7 234 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.6□□□□□ -0.87
TPM4-207ENST00000588032 MIEF2Q96C03 454 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 WDR34Q96EX3 536 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 PTCD3Q96EY7 689 aaKnown RBP9.6□□□□□ -0.87
TPM4-207ENST00000588032 GPR78Q96P69 363 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 SPSB2Q99619 263 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 EFCAB11Q9BUY7 163 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 COPG2Q9UBF2 871 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 TRPC4Q9UBN4 977 aa9.6□□□□□ -0.87
TPM4-207ENST00000588032 TNPO3Q9Y5L0 923 aaKnown RBP9.6□□□□□ -0.87
TPM4-207ENST00000588032 SPTBP11277 2137 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 ANKDD1BA6NHY2 528 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 ARGFXA6NJG6 315 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 K7EPI3 171 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 AGPSO00116 658 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 UBXN8O00124 270 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 UMODP07911 640 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 SERPINA6P08185 405 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 GFAPP14136 432 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 EPB42P16452 691 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 CASP2P42575 452 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 GLRBP48167 497 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 PIK3CGP48736 1102 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 STXBP1P61764 594 aaKnown RBP9.59□□□□□ -0.87
TPM4-207ENST00000588032 IRF8Q02556 426 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 KLC1Q07866 573 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 E2F2Q14209 437 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 NAA30Q147X3 362 aaPredicted RBP9.59□□□□□ -0.87
TPM4-207ENST00000588032 SETDB1Q15047 1291 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 PCBP2Q15366 365 aaKnown RBP eCLIP9.59□□□□□ -0.873e-6■■■□□ 14.6
TPM4-207ENST00000588032 HIST2H2ACQ16777 129 aaPredicted RBP9.59□□□□□ -0.87
TPM4-207ENST00000588032 XKR6Q5GH73 641 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 HIST2H2AA3Q6FI13 130 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 TCTN3Q6NUS6 607 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 ABHD13Q7L211 337 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 MRGPREQ86SM8 312 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 AMER3Q8N944 861 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 KCT2Q8NC54 265 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 ZNF740Q8NDX6 193 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 OR9A4Q8NGU2 314 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 C9orf43Q8TAL5 461 aaPredicted RBP9.59□□□□□ -0.87
TPM4-207ENST00000588032 ACMSDQ8TDX5 336 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 EXT2Q93063 718 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 UBE2E3Q969T4 207 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 ABHD17AQ96GS6 310 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 CRB3Q9BUF7 120 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 YIPF2Q9BWQ6 316 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 ANKZF1Q9H8Y5 726 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 P4HTMQ9NXG6 502 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 OPTCQ9UBM4 332 aa9.59□□□□□ -0.87
TPM4-207ENST00000588032 CTSFQ9UBX1 484 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms