RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-208	ENST00000587263	ANKRD20A1	Q5TYW2	823 aa		13.88	□□□□□ -0.19
RANBP3-208	ENST00000587263	ANKRD20A3	Q5VUR7	823 aa		13.88	□□□□□ -0.19
RANBP3-208	ENST00000587263	VRK3	Q8IV63	474 aa		13.88	□□□□□ -0.19
RANBP3-208	ENST00000587263	RCOR2	Q8IZ40	523 aa		13.88	□□□□□ -0.19
RANBP3-208	ENST00000587263	SLC5A8	Q8N695	610 aa		13.88	□□□□□ -0.19
RANBP3-208	ENST00000587263	OR2A1	Q8NGT9	310 aa		13.88	□□□□□ -0.19
RANBP3-208	ENST00000587263	HMGCLL1	Q8TB92	370 aa		13.88	□□□□□ -0.19
RANBP3-208	ENST00000587263	POLDIP3	Q9BY77	421 aa	Known RBP	13.88	□□□□□ -0.19
RANBP3-208	ENST00000587263	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.88	□□□□□ -0.19
RANBP3-208	ENST00000587263	VN1R1	Q9GZP7	353 aa		13.88	□□□□□ -0.19
RANBP3-208	ENST00000587263	DRC3	Q9H069	523 aa		13.88	□□□□□ -0.19
RANBP3-208	ENST00000587263	LRFN1	Q9P244	771 aa		13.88	□□□□□ -0.19
RANBP3-208	ENST00000587263	hCG_1818297	A0A087WSY0	165 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263		A0A0A6YYC8	382 aa	Predicted RBP	13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	IGHV3-20	A0A0C4DH32	117 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	FAM237B	A0A1B0GVD1	139 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263		I3L1I5	382 aa	Predicted RBP	13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	APOC4-APOC2	K7ER74	178 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	CDK2AP1	O14519	115 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	GPC4	O75487	556 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	APOC2	P02655	101 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	CMPK1	P30085	196 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	FOXN2	P32314	431 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	PTGER1	P34995	402 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	SPARCL1	Q14515	664 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	TMED2	Q15363	201 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	MAPKAPK3	Q16644	382 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	SYT16	Q17RD7	645 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	MFSD4B	Q5TF39	518 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	LRRC8B	Q6P9F7	803 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	LANCL3	Q6ZV70	420 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	LGI4	Q8N135	537 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	PRELID2	Q8N945	189 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	POGLUT1	Q8NBL1	392 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	M1AP	Q8TC57	530 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	GRK7	Q8WTQ7	553 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	KRT35	Q92764	455 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	MAGOHB	Q96A72	148 aa	Known RBP	13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	RMND5B	Q96G75	393 aa	Predicted RBP	13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	CYTH2	Q99418	400 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	DPH7	Q9BTV6	452 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	REPIN1	Q9BWE0	567 aa	Known RBP	13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	DDX47	Q9H0S4	455 aa	Known RBP	13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	TP63	Q9H3D4	680 aa	Predicted RBP	13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	NFU1	Q9UMS0	254 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263	AKAP6	Q13023	2319 aa		13.87	□□□□□ -0.19
RANBP3-208	ENST00000587263		A0A1B0GTH9	108 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	TXNDC9	O14530	226 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	TFEC	O14948	347 aa	Predicted RBP	13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	FOXS1	O43638	330 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	KLK8	O60259	260 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	NME2P1	O60361	137 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	CTAG2	O75638	210 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	SLC25A12	O75746	678 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	SYF2	O95926	243 aa	Known RBP	13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	NME2	P22392	152 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	AGTR2	P50052	363 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	ST13	P50502	369 aa	Known RBP	13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	EIF3B	P55884	814 aa	Known RBP	13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	TAS2R50	P59544	299 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	ADAM8	P78325	824 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	CAV1	Q03135	178 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	POU6F1	Q14863	301 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	HKDC1	Q2TB90	917 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	MINDY4	Q4G0A6	757 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	RNFT1	Q5M7Z0	435 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	FBXO42	Q6P3S6	717 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	DRICH1	Q6PGQ1	229 aa	Predicted RBP	13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	BBS12	Q6ZW61	710 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	CCDC50	Q8IVM0	306 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	CDKL3	Q8IVW4	592 aa	Predicted RBP	13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	CPSF7	Q8N684	471 aa	Known RBP	13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	GSDMB	Q8TAX9	411 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	IFT81	Q8WYA0	676 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	RERG	Q96A58	199 aa	Predicted RBP	13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	NPAS2	Q99743	824 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	C10orf88	Q9H8K7	445 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	MMP25	Q9NPA2	562 aa		13.86	□□□□□ -0.19
RANBP3-208	ENST00000587263	SCN2A	Q99250	2005 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	OR51F1	A6NGY5	319 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263		H3BQF6	201 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	OR1I1	O60431	355 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	PSMA3	P25788	255 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	COIL	P38432	576 aa	Predicted RBP	13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	AVPR1B	P47901	424 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	MEOX1	P50221	254 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	MAT1A	Q00266	395 aa	Known RBP	13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	DMTN	Q08495	405 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	FAM53B	Q14153	422 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	CCNG2	Q16589	344 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	NDUFA9	Q16795	377 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	ACAD11	Q709F0	780 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	KLHDC8B	Q8IXV7	354 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	BBOF1	Q8ND07	529 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	NANOS1	Q8WY41	292 aa	Known RBP	13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	TMEM125	Q96AQ2	219 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	SEC16B	Q96JE7	1060 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	SPATA13	Q96N96	652 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	PLCD4	Q9BRC7	762 aa		13.85	□□□□□ -0.19
RANBP3-208	ENST00000587263	LIME1	Q9H400	295 aa		13.85	□□□□□ -0.19

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