RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 STAG3L4Q8TBR4 150 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 SLC44A1Q8WWI5 657 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 FER1L6-AS2Q96M78 137 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 SLC25A23Q9BV35 468 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 ANKHQ9HCJ1 492 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 IGSF5Q9NSI5 407 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 DNAJC11Q9NVH1 559 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 C14orf105Q9NVL8 296 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 MAP4K5Q9Y4K4 846 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 BOD1L1Q8NFC6 3051 aa14.08□□□□□ -0.16
ATG4D-207ENST00000587256 A0A096LPK6 155 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 EXOC1LA0A1B0GW35 172 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 A6NL46 340 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 VSTM2BA6NLU5 285 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 POC1B-GALNT4F8VUJ3 575 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 SLC28A2O43868 658 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 KERAO60938 352 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 STK16O75716 305 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 NSA2O95478 260 aaKnown RBP14.07□□□□□ -0.16
ATG4D-207ENST00000587256 C2P06681 752 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 MSH2P43246 934 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 SCTRP47872 440 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 GLRBP48167 497 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 SERPINB9P50453 376 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 MAT1AQ00266 395 aaKnown RBP14.07□□□□□ -0.16
ATG4D-207ENST00000587256 RBBP5Q15291 538 aaKnown RBP14.07□□□□□ -0.16
ATG4D-207ENST00000587256 FAM83EQ2M2I3 478 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 VWA2Q5GFL6 755 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 DCAF10Q5QP82 559 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 TMEM214Q6NUQ4 689 aaKnown RBP14.07□□□□□ -0.16
ATG4D-207ENST00000587256 TCTN3Q6NUS6 607 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 KLC3Q6P597 504 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 ASB18Q6ZVZ8 466 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 PRSS41Q7RTY9 318 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 KLHDC8AQ8IYD2 350 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 KCT2Q8NC54 265 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 TM4SF19Q96DZ7 209 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 VPS50Q96JG6 964 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 SARGQ9BW04 601 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 VPS11Q9H270 941 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 MKKSQ9NPJ1 570 aaPredicted RBP14.07□□□□□ -0.16
ATG4D-207ENST00000587256 SEMA3GQ9NS98 782 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 ZFP69BQ9UJL9 534 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 C3orf18Q9UK00 162 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 FBXL4Q9UKA2 621 aa14.07□□□□□ -0.16
ATG4D-207ENST00000587256 FASNP49327 2511 aaKnown RBP14.06□□□□□ -0.16
ATG4D-207ENST00000587256 PCSK5Q92824 1860 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 IGLV3-12A0A075B6K2 115 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 HMX2A2RU54 273 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 SYCE1LA8MT33 242 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 H0YIG0 161 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 AGPSO00116 658 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 UBXN8O00124 270 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 CLGNO14967 610 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 TAPBPO15533 448 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 CCNT2O60583 730 aaKnown RBP14.06□□□□□ -0.16
ATG4D-207ENST00000587256 KRT38O76015 456 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 ALDOAP04075 364 aaKnown RBP14.06□□□□□ -0.16
ATG4D-207ENST00000587256 ACPPP15309 386 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 CXCR2P25025 360 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 PWP1Q13610 501 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 RAPSNQ13702 412 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 SLBPQ14493 270 aaKnown RBP eCLIP14.06□□□□□ -0.16
ATG4D-207ENST00000587256 PDK4Q16654 411 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 SYT16Q17RD7 645 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 TUBB8Q3ZCM7 444 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 TRMT10CQ7L0Y3 403 aaKnown RBP14.06□□□□□ -0.16
ATG4D-207ENST00000587256 LRRC70Q7Z2Q7 622 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 ISCA2Q86U28 154 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 ZC3H7AQ8IWR0 971 aaKnown RBP14.06□□□□□ -0.16
ATG4D-207ENST00000587256 GSPT2Q8IYD1 628 aaKnown RBP14.06□□□□□ -0.16
ATG4D-207ENST00000587256 CENPLQ8N0S6 344 aaPredicted RBP14.06□□□□□ -0.16
ATG4D-207ENST00000587256 ESAMQ96AP7 390 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 NACC2Q96BF6 587 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 NXNL1Q96CM4 212 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 ATOH8Q96SQ7 321 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 CAPS2Q9BXY5 557 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 L2HGDHQ9H9P8 463 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 PRM3Q9NNZ6 103 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 GPR83Q9NYM4 423 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 GPRC5BQ9NZH0 403 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 HCN3Q9P1Z3 774 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 PCDHGA9Q9Y5G4 932 aaKnown RBP14.06□□□□□ -0.16
ATG4D-207ENST00000587256 HS3ST3B1Q9Y662 390 aa14.06□□□□□ -0.16
ATG4D-207ENST00000587256 ZNF860A6NHJ4 632 aa14.05□□□□□ -0.16
ATG4D-207ENST00000587256 IDSB3KWA1 339 aa14.05□□□□□ -0.16
ATG4D-207ENST00000587256 K7EM74 188 aa14.05□□□□□ -0.16
ATG4D-207ENST00000587256 SGK494L7N484 410 aa14.05□□□□□ -0.16
ATG4D-207ENST00000587256 SOCS6O14544 535 aa14.05□□□□□ -0.16
ATG4D-207ENST00000587256 MAP2K7O14733 419 aa14.05□□□□□ -0.16
ATG4D-207ENST00000587256 ALOX12BO75342 701 aa14.05□□□□□ -0.16
ATG4D-207ENST00000587256 H2AFYO75367 372 aaKnown RBP14.05□□□□□ -0.16
ATG4D-207ENST00000587256 RDH16O75452 317 aa14.05□□□□□ -0.16
ATG4D-207ENST00000587256 KLHL18O94889 574 aa14.05□□□□□ -0.16
ATG4D-207ENST00000587256 HEXBP07686 556 aa14.05□□□□□ -0.16
ATG4D-207ENST00000587256 ABHD2P08910 425 aa14.05□□□□□ -0.16
ATG4D-207ENST00000587256 C1GALT1C1LP0DN25 315 aa14.05□□□□□ -0.16
ATG4D-207ENST00000587256 AHRP35869 848 aa14.05□□□□□ -0.16
ATG4D-207ENST00000587256 GGT5P36269 586 aa14.05□□□□□ -0.16
ATG4D-207ENST00000587256 SNRPNP63162 240 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms