RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 ZW10O43264 779 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 KLHL41O60662 606 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 C9P02748 559 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 C1GALT1C1LP0DN25 315 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 NPPBP16860 134 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 EPORP19235 508 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 NCF2P19878 526 aaPredicted RBP12.13□□□□□ -0.47
VMP1-202ENST00000585847 GRK3P35626 688 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 GDF5P43026 501 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 CCR10P46092 362 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 LSSP48449 732 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 CCR8P51685 355 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 GFERP55789 205 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 STX5Q13190 355 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 C18orf21Q32NC0 220 aaPredicted RBP12.13□□□□□ -0.47
VMP1-202ENST00000585847 AMZ1Q400G9 498 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 DNAL1Q4LDG9 190 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 PDCD4Q53EL6 469 aaKnown RBP12.13□□□□□ -0.47
VMP1-202ENST00000585847 CCDC157Q569K6 752 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 B3GNT8Q7Z7M8 397 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 SLITRK4Q8IW52 837 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 LAS2Q8IYD9 372 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 CARFQ8N187 725 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 MIER2Q8N344 545 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 C2orf73Q8N5S3 287 aaPredicted RBP12.13□□□□□ -0.47
VMP1-202ENST00000585847 GLB1L3Q8NCI6 653 aaPredicted RBP12.13□□□□□ -0.47
VMP1-202ENST00000585847 LCN9Q8WX39 176 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 THOC1Q96FV9 657 aaKnown RBP12.13□□□□□ -0.47
VMP1-202ENST00000585847 OR52B2Q96RD2 323 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 AIF1LQ9BQI0 150 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 CENPKQ9BS16 269 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 SARGQ9BW04 601 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 CCDC106Q9BWC9 280 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 SHCBP1LQ9BZQ2 653 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 BRINP2Q9C0B6 783 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 RAB33BQ9H082 229 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 C1orf21Q9H246 121 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 LRMDAQ9H2I8 198 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 SDR39U1Q9NRG7 319 aaPredicted RBP12.13□□□□□ -0.47
VMP1-202ENST00000585847 INTS7Q9NVH2 962 aaKnown RBP12.13□□□□□ -0.47
VMP1-202ENST00000585847 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.13□□□□□ -0.47
VMP1-202ENST00000585847 ZIM2Q9NZV7 527 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 PDP2Q9P2J9 529 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 EPHA6Q9UF33 1036 aa12.13□□□□□ -0.47
VMP1-202ENST00000585847 EIF3LQ9Y262 564 aaKnown RBP12.13□□□□□ -0.47
VMP1-202ENST00000585847 WBP11Q9Y2W2 641 aaKnown RBP12.13□□□□□ -0.47
VMP1-202ENST00000585847 MN1Q10571 1320 aaPredicted RBP12.12□□□□□ -0.47
VMP1-202ENST00000585847 ITPR1Q14643 2758 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 KCNE1BA0A087WTH5 132 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 D6RAR5 112 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 PRMT3O60678 531 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 UBOX5O94941 541 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 SEMA3DO95025 777 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 CHRM5P08912 532 aaPredicted RBP12.12□□□□□ -0.47
VMP1-202ENST00000585847 ESRRAP11474 423 aaPredicted RBP12.12□□□□□ -0.47
VMP1-202ENST00000585847 PRPS2P11908 318 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 AMD1P17707 334 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 POLR2CP19387 275 aaPredicted RBP12.12□□□□□ -0.47
VMP1-202ENST00000585847 CMPK1P30085 196 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 CAPZBP47756 277 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 YBX1P67809 324 aaKnown RBP12.12□□□□□ -0.47
VMP1-202ENST00000585847 E2F1Q01094 437 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 PRDX1Q06830 199 aaKnown RBP12.12□□□□□ -0.47
VMP1-202ENST00000585847 ZFP36L1Q07352 338 aaKnown RBP12.12□□□□□ -0.47
VMP1-202ENST00000585847 BIRC2Q13490 618 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 PLCL1Q15111 1095 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 NR6A1Q15406 480 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 SPIN4Q56A73 249 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 VWA5B1Q5TIE3 1220 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 CACHD1Q5VU97 1274 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 NXPE4Q6UWF7 544 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 ZFAND4Q86XD8 727 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 MYLK4Q86YV6 388 aaPredicted RBP12.12□□□□□ -0.47
VMP1-202ENST00000585847 PPFIBP2Q8ND30 876 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 OR10G6Q8NH81 332 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 SELENOMQ8WWX9 145 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 ADAMTS14Q8WXS8 1223 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 NCSTNQ92542 709 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 CMTM7Q96FZ5 175 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 NSL1Q96IY1 281 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 OR2A14Q96R47 310 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 SLC25A23Q9BV35 468 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 SEMA6CQ9H3T2 930 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 SRMSQ9H3Y6 488 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 WDR55Q9H6Y2 383 aaPredicted RBP12.12□□□□□ -0.47
VMP1-202ENST00000585847 AKTIPQ9H8T0 292 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 HRASLS2Q9NWW9 162 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 C1orf109Q9NX04 203 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 SIRT5Q9NXA8 310 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 ACTR10Q9NZ32 417 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 SEMA5BQ9P283 1151 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 ZNF490Q9ULM2 529 aaPredicted RBP12.12□□□□□ -0.47
VMP1-202ENST00000585847 KLK4Q9Y5K2 254 aa12.12□□□□□ -0.47
VMP1-202ENST00000585847 DMXL2Q8TDJ6 3036 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 E7EQ34 232 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 PPP6CO00743 305 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 LSM1O15116 133 aaKnown RBP12.11□□□□□ -0.47
VMP1-202ENST00000585847 CAPN5O15484 640 aaPredicted RBP12.11□□□□□ -0.47
VMP1-202ENST00000585847 DUX1O43812 170 aa12.11□□□□□ -0.47
VMP1-202ENST00000585847 KIF1CO43896 1103 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms