RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 GTDC1Q4AE62 458 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 C6orf52Q5T4I8 152 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 CPZQ66K79 652 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 OR52E8Q6IFG1 317 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 TMIGD1Q6UXZ0 262 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 EP400NLQ6ZTU2 488 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 FAM129CQ86XR2 697 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 CACUL1Q86Y37 369 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 CHERPQ8IWX8 916 aaKnown RBP10.83□□□□□ -0.68
LIG3-204ENST00000585740 PGBD3Q8N328 593 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 IL17RCQ8NAC3 791 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 OR7A2PQ8NGA2 310 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 CDC26Q8NHZ8 85 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 EZH1Q92800 747 aaPredicted RBP10.83□□□□□ -0.68
LIG3-204ENST00000585740 NCLNQ969V3 563 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 SH3KBP1Q96B97 665 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 ERLEC1Q96DZ1 483 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 TRAPPC9Q96Q05 1148 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 FERD3LQ96RJ6 166 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 PHOX2BQ99453 314 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 SEPHS2Q99611 448 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 SLC29A1Q99808 456 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 CENPKQ9BS16 269 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 INPP5KQ9BT40 448 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 APOOQ9BUR5 198 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 RAD21L1Q9H4I0 556 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 REEP4Q9H6H4 257 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 ZNF696Q9H7X3 374 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 DCAF13Q9NV06 445 aaKnown RBP10.83□□□□□ -0.68
LIG3-204ENST00000585740 NDUFA13Q9P0J0 144 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 ZNF639Q9UID6 485 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 VPS4AQ9UN37 437 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 USP22Q9UPT9 525 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 PRKAB1Q9Y478 270 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 PCDHB11Q9Y5F2 797 aa10.83□□□□□ -0.68
LIG3-204ENST00000585740 TBC1D3DA0A087WVF3 549 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 TBC1D3IA0A087WXS9 549 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 TBC1D3EA0A087X179 549 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 TBC1D3KA0A087X1G2 549 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 C7orf72A4D263 438 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 TBC1D3FA6NER0 549 aaPredicted RBP10.82□□□□□ -0.68
LIG3-204ENST00000585740 ANKDD1BA6NHY2 528 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 EIF4E1BA6NMX2 242 aaKnown RBP10.82□□□□□ -0.68
LIG3-204ENST00000585740 TBC1D3LB9A6J9 549 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 SOCS2O14508 198 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 PRSS23O95084 383 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 CCNDBP1O95273 360 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 CPSF4O95639 269 aaKnown RBP10.82□□□□□ -0.68
LIG3-204ENST00000585740 EGFP01133 1207 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 TBC1D3HP0C7X1 549 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 ACADMP11310 421 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 ACP5P13686 325 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 GLULP15104 373 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 CKMT2P17540 419 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 GPX2P18283 190 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 IGFALSP35858 605 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 CDKN2CP42773 168 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 DLX2Q07687 328 aaPredicted RBP10.82□□□□□ -0.68
LIG3-204ENST00000585740 BIRC2Q13490 618 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 MYBPC3Q14896 1274 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 PON2Q15165 354 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 HKDC1Q2TB90 917 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 FBXO43Q4G163 708 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 EOGTQ5NDL2 527 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 TBC1D3GQ6DHY5 549 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 TBC1D3CQ6IPX1 549 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 KIAA1211LQ6NV74 962 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 ZNF621Q6ZSS3 439 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 CHST15Q7LFX5 561 aaPredicted RBP10.82□□□□□ -0.68
LIG3-204ENST00000585740 PAGE2Q7Z2X7 111 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 COMMD6Q7Z4G1 85 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 ANKRD46Q86W74 232 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 TBC1D3Q8IZP1 549 aaPredicted RBP10.82□□□□□ -0.68
LIG3-204ENST00000585740 SVOPLQ8N434 492 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 CBR4Q8N4T8 237 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 TRIML2Q8N7C3 387 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 GPR156Q8NFN8 814 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 ABHD11Q8NFV4 315 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 SPDYE1Q8NFV5 336 aaPredicted RBP10.82□□□□□ -0.68
LIG3-204ENST00000585740 TTLQ8NG68 377 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 GFM2Q969S9 779 aaKnown RBP10.82□□□□□ -0.68
LIG3-204ENST00000585740 MIEF2Q96C03 454 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 SDCCAG3Q96C92 435 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 SLC47A1Q96FL8 570 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 SIPA1Q96FS4 1042 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 SCARF2Q96GP6 870 aaPredicted RBP10.82□□□□□ -0.68
LIG3-204ENST00000585740 CNBD2Q96M20 576 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 C12orf66Q96MD2 445 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 RDH12Q96NR8 316 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 IL17FQ96PD4 163 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 TBCDQ9BTW9 1192 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 MRPS26Q9BYN8 205 aaKnown RBP10.82□□□□□ -0.68
LIG3-204ENST00000585740 ANKRD60Q9BZ19 345 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 MKRN2Q9H000 416 aaKnown RBP10.82□□□□□ -0.68
LIG3-204ENST00000585740 BTBD1Q9H0C5 482 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 IKZF5Q9H5V7 419 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 PNPLA3Q9NST1 481 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 DNAJB9Q9UBS3 223 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 RPS6KA6Q9UK32 745 aa10.82□□□□□ -0.68
LIG3-204ENST00000585740 PCDHGB4Q9UN71 923 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms