RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 ANKRD12Q6UB98 2062 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 ATMQ13315 3056 aa13.25□□□□□ -0.29
TRAF4-215ENST00000584944 COL27A1Q8IZC6 1860 aaPredicted RBP13.25□□□□□ -0.29
TRAF4-215ENST00000584944 KCNE1BA0A087WTH5 132 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 LOC105369274A0A096LPK9 316 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 LOC102723532A0A0G2JNH3 316 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 CDRT15L2A8MXV6 281 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 E2F3O00716 465 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 NRP2O60462 931 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 PIM1P11309 404 aaPredicted RBP13.24□□□□□ -0.29
TRAF4-215ENST00000584944 GSTM2P28161 218 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 AHRP35869 848 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 BCL6P41182 706 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 HNF4AP41235 474 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 CXADRP78310 365 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 CYP4F2P78329 520 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 REEP5Q00765 189 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 TGM3Q08188 693 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 ABHD18Q0P651 414 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 TBCCQ15814 346 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 ZXDCQ2QGD7 858 aaPredicted RBP13.24□□□□□ -0.29
TRAF4-215ENST00000584944 AGBL2Q5U5Z8 902 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 BROXQ5VW32 411 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 LIPJQ5W064 366 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 FBXO42Q6P3S6 717 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 PCSK4Q6UW60 755 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 SH2D5Q6ZV89 423 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 TTLL10Q6ZVT0 673 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 MILR1Q7Z6M3 343 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 EXOC3L1Q86VI1 746 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 ZFAND4Q86XD8 727 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 CACNA2D3Q8IZS8 1091 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 OR4N4Q8N0Y3 316 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 ANKRD42Q8N9B4 389 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 GALNT6Q8NCL4 622 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 OR4K1Q8NGD4 311 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 NAF1Q96HR8 494 aaKnown RBP13.24□□□□□ -0.29
TRAF4-215ENST00000584944 FAR2Q96K12 515 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 C17orf62Q9BQA9 187 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 CUTCQ9NTM9 273 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 GEMIN8Q9NWZ8 242 aaKnown RBP13.24□□□□□ -0.29
TRAF4-215ENST00000584944 SLC17A7Q9P2U7 560 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 ZFP69BQ9UJL9 534 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 PILRAQ9UKJ1 303 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 PCTPQ9UKL6 214 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 EMCNQ9ULC0 261 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 PADI1Q9ULC6 663 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 CDC14AQ9UNH5 594 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 PCDHGA4Q9Y5G9 962 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 PCDHGA11Q9Y5H2 935 aa13.24□□□□□ -0.29
TRAF4-215ENST00000584944 A0A088AWK7 358 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 A0A1B0GX78 115 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 LRRC14BA6NHZ5 514 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 PRPF4O43172 522 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRAF4-215ENST00000584944 UGDHO60701 494 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 TRIM13O60858 407 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 STATHP02808 62 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 LIPCP11150 499 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 ZNF10P21506 573 aaPredicted RBP13.23□□□□□ -0.29
TRAF4-215ENST00000584944 SERPINB1P30740 379 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 AVPR1BP47901 424 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 NAGLUP54802 743 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 STXBP1P61764 594 aaKnown RBP13.23□□□□□ -0.29
TRAF4-215ENST00000584944 CLCQ05315 142 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 LCP2Q13094 533 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 IFT88Q13099 833 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 PWP1Q13610 501 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 DDX39BQ13838 428 aaKnown RBP13.23□□□□□ -0.29
TRAF4-215ENST00000584944 CPSF6Q16630 551 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRAF4-215ENST00000584944 KIF26BQ2KJY2 2108 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 ZNF678Q5SXM1 525 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 C1orf189Q5VU69 101 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 LIPMQ5VYY2 423 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 ABHD13Q7L211 337 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 NUDCD3Q8IVD9 361 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 TRPC4APQ8TEL6 797 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 PMEPA1Q969W9 287 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 COL26A1Q96A83 441 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 L3HYPDHQ96EM0 354 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 SEC16BQ96JE7 1060 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 ATP6V1G3Q96LB4 118 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 OR2A5Q96R48 311 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 DPH2Q9BQC3 489 aaPredicted RBP13.23□□□□□ -0.29
TRAF4-215ENST00000584944 YIPF2Q9BWQ6 316 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 C12orf65Q9H3J6 166 aaKnown RBP13.23□□□□□ -0.29
TRAF4-215ENST00000584944 ELOVL6Q9H5J4 265 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 EML4Q9HC35 981 aaKnown RBP13.23□□□□□ -0.29
TRAF4-215ENST00000584944 OXSMQ9NWU1 459 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 ADGRE2Q9UHX3 823 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 ASB1Q9Y576 335 aa13.23□□□□□ -0.29
TRAF4-215ENST00000584944 FLNBO75369 2602 aaKnown RBP13.23□□□□□ -0.29
TRAF4-215ENST00000584944 ZNF462Q96JM2 2506 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 COL6A6A6NMZ7 2263 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 HMGB1P1B2RPK0 211 aaPredicted RBP13.22□□□□□ -0.29
TRAF4-215ENST00000584944 G3V2L1 256 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 KLK10O43240 276 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 RAD1O60671 282 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 TIAF1O95411 115 aa13.22□□□□□ -0.29
TRAF4-215ENST00000584944 RPS17P08708 135 aaKnown RBP13.22□□□□□ -0.29
TRAF4-215ENST00000584944 SBK3P0C264 359 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms