RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 ZSCAN9O15535 394 aaPredicted RBP9.89□□□□□ -0.83
RFFL-212ENST00000584655 IL7RP16871 459 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 ZNF30P17039 623 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 NDUFV2P19404 249 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 ITGB7P26010 798 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 DDX6P26196 483 aaKnown RBP eCLIP9.89□□□□□ -0.83
RFFL-212ENST00000584655 MAPK12P53778 367 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 COX20Q5RI15 118 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 PIP5KL1Q5T9C9 394 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 SHISA6Q6ZSJ9 500 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 DPPA4Q7L190 304 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 TECPR1Q7Z6L1 1165 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 MIPOL1Q8TD10 442 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 SDCCAG3Q96C92 435 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 BARD1Q99728 777 aaKnown RBP9.89□□□□□ -0.83
RFFL-212ENST00000584655 SLC25A37Q9NYZ2 338 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 HSFX1Q9UBD0 423 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 IL20RAQ9UHF4 553 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 BOD1L1Q8NFC6 3051 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 GABRR3A8MPY1 467 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 CLOCKO15516 846 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 ADAM23O75077 832 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 LATS1O95835 1130 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 SOD1P00441 154 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 C8GP07360 202 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 NPPBP16860 134 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 FCARP24071 287 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 IDH2P48735 452 aaKnown RBP9.89□□□□□ -0.83
RFFL-212ENST00000584655 CCT8P50990 548 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 RPL26P61254 145 aaKnown RBP9.89□□□□□ -0.83
RFFL-212ENST00000584655 CTBSQ01459 385 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 SLC14A2Q15849 920 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 PRAMEF17Q5VTA0 474 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 TTC33Q6PID6 262 aaPredicted RBP9.89□□□□□ -0.83
RFFL-212ENST00000584655 EFL1Q7Z2Z2 1120 aaKnown RBP9.89□□□□□ -0.83
RFFL-212ENST00000584655 RNF130Q86XS8 419 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 Q8N9G6 341 aaPredicted RBP9.89□□□□□ -0.83
RFFL-212ENST00000584655 TMEM125Q96AQ2 219 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 TMIGD2Q96BF3 282 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 TOE1Q96GM8 510 aaKnown RBP9.89□□□□□ -0.83
RFFL-212ENST00000584655 CCT7Q99832 543 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 DUSP26Q9BV47 211 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 UBAP1Q9NZ09 502 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 KIF17Q9P2E2 1029 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 RPL26L1Q9UNX3 145 aaKnown RBP9.89□□□□□ -0.83
RFFL-212ENST00000584655 NCKAP1Q9Y2A7 1128 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 ST14Q9Y5Y6 855 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 PIPSLA2A3N6 862 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 GFRA2O00451 464 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 APOL3O95236 402 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 LDLRP01130 860 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 PRKCQQ04759 706 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 GAB4Q2WGN9 574 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 FGD3Q5JSP0 725 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 AGBL4Q5VU57 503 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 ZNF776Q68DI1 518 aaPredicted RBP9.89□□□□□ -0.83
RFFL-212ENST00000584655 FAAH2Q6GMR7 532 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 IRGCQ6NXR0 463 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 NAGSQ8N159 534 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 BPIFB6Q8NFQ5 453 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 B4GALNT2Q8NHY0 566 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 RAD51AP1Q96B01 352 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 MAELQ96JY0 434 aaKnown RBP9.89□□□□□ -0.83
RFFL-212ENST00000584655 RIPOR3Q96MK2 946 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 FAF1Q9UNN5 650 aaPredicted RBP9.89□□□□□ -0.83
RFFL-212ENST00000584655 LZTS1Q9Y250 596 aa9.89□□□□□ -0.83
RFFL-212ENST00000584655 A8MUA0 341 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 K7EQS6 105 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 AREL1O15033 823 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 BCAS2O75934 225 aaPredicted RBP9.88□□□□□ -0.83
RFFL-212ENST00000584655 EBLN1P0CF75 366 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 PNLIPRP1P54315 467 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 SIM1P81133 766 aaPredicted RBP9.88□□□□□ -0.83
RFFL-212ENST00000584655 FAM43BQ6ZT52 329 aaPredicted RBP9.88□□□□□ -0.83
RFFL-212ENST00000584655 OR1E3Q8WZA6 343 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 GTPBP3Q969Y2 492 aaKnown RBP9.88□□□□□ -0.83
RFFL-212ENST00000584655 VOPP1Q96AW1 172 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 PPCDCQ96CD2 204 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 ASB9Q96DX5 294 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 CEP44Q9C0F1 390 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 BTBD1Q9H0C5 482 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 MMADHCQ9H3L0 296 aaPredicted RBP9.88□□□□□ -0.83
RFFL-212ENST00000584655 PIEZO2Q9H5I5 2752 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 FAM234BA2RU67 622 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 CARNS1A5YM72 827 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 OR6C74A6NCV1 312 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 SLC28A1O00337 649 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 CXCR6O00574 342 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 EPN2O95208 641 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 ALAS2P22557 587 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 ELK4P28324 431 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 SNRPNP63162 240 aaKnown RBP9.88□□□□□ -0.83
RFFL-212ENST00000584655 USP39Q53GS9 565 aaKnown RBP9.88□□□□□ -0.83
RFFL-212ENST00000584655 TJAP1Q5JTD0 557 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 FBXL6Q8N531 539 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 C7orf57Q8NEG2 295 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 ISG20Q96AZ6 181 aaKnown RBP9.88□□□□□ -0.83
RFFL-212ENST00000584655 SLCO4A1Q96BD0 722 aa9.88□□□□□ -0.83
RFFL-212ENST00000584655 TEX10Q9NXF1 929 aaPredicted RBP9.88□□□□□ -0.83
RFFL-212ENST00000584655 SCN8AQ9UQD0 1980 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms