RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 TIGD4Q8IY51 512 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 YIPF7Q8N8F6 280 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 SETD6Q8TBK2 473 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 SLC22A18Q96BI1 424 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 TMEM5Q9Y2B1 443 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 PCDHB3Q9Y5E6 796 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 HSPE1-MOB4S4R3N1 261 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 CAPN5O15484 640 aaPredicted RBP12.67□□□□□ -0.38
RNF43-208ENST00000584437 MASP1P48740 699 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 CTBP2P56545 445 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 PRAMEF14Q5SWL7 426 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 PRAMEF13Q5VWM6 474 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 NANOGP8Q6NSW7 305 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 FUT10Q6P4F1 479 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 AMIGO1Q86WK6 493 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 HDDC3Q8N4P3 179 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 PYCR2Q96C36 320 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 LGALS12Q96DT0 336 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 KLRG1Q96E93 195 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 NANOGQ9H9S0 305 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 FAIMQ9NVQ4 179 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 MS4A12Q9NXJ0 267 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 ABCD2Q9UBJ2 740 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 MROH2AA6NES4 1674 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 LOC730098B7Z3J9 87 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 TGFB1P01137 390 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 TFPTP0C1Z6 253 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 OCLNQ16625 522 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 TOR1AIP1Q5JTV8 583 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 UBQLNLQ8IYU4 475 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 TMEM145Q8NBT3 493 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 ATP6V1C2Q8NEY4 427 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 OR5AK3PQ8NH89 298 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 ASB12Q8WXK4 309 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 ZNF285Q96NJ3 590 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 CCDC32Q9BV29 185 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 SLC38A8A6NNN8 435 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 TREHO43280 583 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 EPHX1P07099 455 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 IL3P08700 152 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 MAD2L1BPQ15013 274 aaPredicted RBP12.67□□□□□ -0.38
RNF43-208ENST00000584437 MINDY4Q4G0A6 757 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 VARS2Q5ST30 1063 aaKnown RBP12.67□□□□□ -0.38
RNF43-208ENST00000584437 CILP2Q8IUL8 1156 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 SLC22A15Q8IZD6 547 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 PSD4Q8NDX1 1056 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 OR56A1Q8NGH5 318 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 TCEAL4Q96EI5 215 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 HSPA12BQ96MM6 686 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 MIR1-1HGQ9H1L0 117 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 SRMSQ9H3Y6 488 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 NLGN3Q9NZ94 848 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 RABL2AQ9UBK7 228 aaPredicted RBP12.67□□□□□ -0.38
RNF43-208ENST00000584437 EXTL2Q9UBQ6 330 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 SRRDQ9UH36 339 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 RABL2BQ9UNT1 228 aa12.67□□□□□ -0.38
RNF43-208ENST00000584437 KLRG2A4D1S0 409 aaPredicted RBP12.66□□□□□ -0.38
RNF43-208ENST00000584437 BOLA2-SMG1P6H3BVE0 249 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 SAP18O00422 153 aaKnown RBP12.66□□□□□ -0.38
RNF43-208ENST00000584437 SEPT4O43236 478 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 RFPL2O75678 378 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 RNASEH2AO75792 299 aaKnown RBP12.66□□□□□ -0.38
RNF43-208ENST00000584437 CLUP10909 449 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 STC1P52823 247 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 MAPK14Q16539 360 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 TMED4Q7Z7H5 227 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 CHCHD4Q8N4Q1 142 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 ZNF527Q8NB42 609 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 MSANTD3Q96H12 275 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 EPYCQ99645 322 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 RNF208Q9H0X6 261 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 DNAJC27Q9NZQ0 273 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 C14orf166Q9Y224 244 aaKnown RBP12.66□□□□□ -0.38
RNF43-208ENST00000584437 CLCA1A8K7I4 914 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 DIRAS1O95057 198 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 PET100P0DJ07 73 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 CCL23P55773 120 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 CAP1Q01518 475 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 SLC13A2Q13183 592 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 TREML2Q5T2D2 321 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 PSRC1Q6PGN9 363 aaPredicted RBP12.66□□□□□ -0.38
RNF43-208ENST00000584437 PIM3Q86V86 326 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 TCEANCQ8N8B7 351 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 GAL3ST4Q96RP7 486 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 BCO2Q9BYV7 579 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 KCNH6Q9H252 994 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 CPQQ9Y646 472 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 GAD2Q05329 585 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 DGKZQ13574 1117 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 SNAP47Q5SQN1 464 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 CCBE1Q6UXH8 406 aaPredicted RBP12.66□□□□□ -0.38
RNF43-208ENST00000584437 CHRDL2Q6WN34 429 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 UBE2Q1Q7Z7E8 422 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 GID4Q8IVV7 300 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 SHKBP1Q8TBC3 707 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 SLC7A6OSQ96CW6 309 aaPredicted RBP12.66□□□□□ -0.38
RNF43-208ENST00000584437 TM9SF2Q99805 663 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 SLC39A1Q9NY26 324 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 SLC2A6Q9UGQ3 507 aa12.66□□□□□ -0.38
RNF43-208ENST00000584437 PCDHGB5Q9Y5G0 923 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms