RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 IGKV1-8A0A0C4DH67 115 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 CCL21O00585 134 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 MAP2K7O14733 419 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 PCDH17O14917 1159 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 FANCGO15287 622 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 MED26O95402 600 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 C8GP07360 202 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 F7P08709 466 aaPredicted RBP10.56□□□□□ -0.72
CCDC47-206ENST00000584112 ANXA5P08758 320 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 ZGLP1P0C6A0 271 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 ACPPP15309 386 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 IMPA1P29218 277 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 DHX9Q08211 1270 aaKnown RBP10.56□□□□□ -0.72
CCDC47-206ENST00000584112 SP140Q13342 867 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 DSG2Q14126 1118 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 NDUFA9Q16795 377 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 CYHR1Q6ZMK1 362 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 KIAA0408Q6ZU52 694 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 SYDE1Q6ZW31 735 aaPredicted RBP10.56□□□□□ -0.72
CCDC47-206ENST00000584112 PIWIL4Q7Z3Z4 852 aaKnown RBP10.56□□□□□ -0.72
CCDC47-206ENST00000584112 ADCK2Q7Z695 626 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 TMEM200AQ86VY9 491 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 TMEM151BQ8IW70 566 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 OR11G2Q8NGC1 345 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 CCDC138Q96M89 665 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 RUNDC3BQ96NL0 473 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 OR2A5Q96R48 311 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 LHPPQ9H008 270 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 DRC3Q9H069 523 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 LIME1Q9H400 295 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 EPS8L2Q9H6S3 715 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 MKKSQ9NPJ1 570 aaPredicted RBP10.56□□□□□ -0.72
CCDC47-206ENST00000584112 ABCF3Q9NUQ8 709 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 TMEM184CQ9NVA4 438 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 TRMT1Q9NXH9 659 aaKnown RBP10.56□□□□□ -0.72
CCDC47-206ENST00000584112 TRPC4Q9UBN4 977 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 C3orf18Q9UK00 162 aa10.56□□□□□ -0.72
CCDC47-206ENST00000584112 INTS1Q8N201 2190 aaKnown RBP10.55□□□□□ -0.72
CCDC47-206ENST00000584112 TRGV8A0A0C4DH27 118 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 PABPN1LA6NDY0 278 aaKnown RBP10.55□□□□□ -0.72
CCDC47-206ENST00000584112 MASP2O00187 686 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 HPP00738 406 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 CCND1P24385 295 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 CXCR2P25025 360 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 RPS15AP62244 130 aaKnown RBP10.55□□□□□ -0.72
CCDC47-206ENST00000584112 ADORA2A-AS1P86434 159 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 RUNX1T1Q06455 604 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 FAM53BQ14153 422 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 MORF4L2Q15014 288 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 HKDC1Q2TB90 917 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 BBS9Q3SYG4 887 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 IGFL2Q6UWQ7 119 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 RPTNQ6XPR3 784 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 Q6ZS92 163 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 GALNT7Q86SF2 657 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 CNTN4Q8IWV2 1026 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 LRRC56Q8IYG6 542 aaPredicted RBP10.55□□□□□ -0.72
CCDC47-206ENST00000584112 PRSS58Q8IYP2 241 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 PDIK1LQ8N165 341 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 MYO1HQ8N1T3 1032 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 DTWD1Q8N5C7 304 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 PPP4R1Q8TF05 950 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 ANP32BQ92688 251 aaKnown RBP10.55□□□□□ -0.72
CCDC47-206ENST00000584112 MMABQ96EY8 250 aaPredicted RBP10.55□□□□□ -0.72
CCDC47-206ENST00000584112 CERS2Q96G23 380 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 NDNQ99608 321 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 WDR77Q9BQA1 342 aaPredicted RBP10.55□□□□□ -0.72
CCDC47-206ENST00000584112 YIPF2Q9BWQ6 316 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 SH3BGRL2Q9UJC5 107 aa10.55□□□□□ -0.72
CCDC47-206ENST00000584112 CORO1CQ9ULV4 474 aaPredicted RBP10.55□□□□□ -0.72
CCDC47-206ENST00000584112 NSG1A0A0A6YYJ2 146 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 IDSB3KWA1 339 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 HAT1O14929 419 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 SLC16A5O15375 505 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 ALOX12BO75342 701 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 F12P00748 615 aaPredicted RBP10.54□□□□□ -0.72
CCDC47-206ENST00000584112 HIST1H2AGP0C0S8 130 aaPredicted RBP10.54□□□□□ -0.72
CCDC47-206ENST00000584112 HIST1H2ADP20671 130 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 FDXRP22570 491 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 GRK3P35626 688 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 SLC26A3P40879 764 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 AVPR1BP47901 424 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 EMP2P54851 167 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 TBPL1P62380 186 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 AP2B1P63010 937 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 ATG9BQ674R7 924 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 C17orf64Q86WR6 236 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 KBTBD2Q8IY47 623 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 EEF1AKMT1Q8WVE0 214 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 FAR1Q8WVX9 515 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 LRRC39Q96DD0 335 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 THAP11Q96EK4 314 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 THOC3Q96J01 351 aaKnown RBP10.54□□□□□ -0.72
CCDC47-206ENST00000584112 HIST1H2AHQ96KK5 128 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 HIST1H2AJQ99878 128 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 H2AFJQ9BTM1 129 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 FAM129AQ9BZQ8 928 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 TGIF2Q9GZN2 237 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 ENKD1Q9H0I2 346 aa10.54□□□□□ -0.72
CCDC47-206ENST00000584112 KCNF1Q9H3M0 494 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms