RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 GULP1Q9UBP9 304 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 PLAGL1Q9UM63 463 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 SH2B3Q9UQQ2 575 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 GPC6Q9Y625 555 aaPredicted RBP13.18□□□□□ -0.3
SRSF1-205ENST00000582730 PLXNA2O75051 1894 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 EDDM13A0A1B0GTR0 161 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 hCG_2039718K7EN88 272 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 POP7O75817 140 aaKnown RBP13.18□□□□□ -0.3
SRSF1-205ENST00000582730 SOD1P00441 154 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 ITGB7P26010 798 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 AQP1P29972 269 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 HLCSP50747 726 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 ELAVL3Q14576 367 aaKnown RBP13.18□□□□□ -0.3
SRSF1-205ENST00000582730 DPY19L1Q2PZI1 675 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 CPTPQ5TA50 214 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 ZDHHC21Q8IVQ6 265 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 BPIFB6Q8NFQ5 453 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 OR56A3Q8NH54 315 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 TUBA1CQ9BQE3 449 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 FANCEQ9HB96 536 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 RWDD3Q9Y3V2 267 aa13.18□□□□□ -0.3
SRSF1-205ENST00000582730 H0YIV9 168 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 PSMD11O00231 422 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 NPC1O15118 1278 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 PCDH7O60245 1069 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 CLPXO76031 633 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 TGFB1P01137 390 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 EPHX1P07099 455 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 WASP42768 502 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 TMBIM6P55061 237 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 RPS3AP61247 264 aaKnown RBP13.17□□□□□ -0.3
SRSF1-205ENST00000582730 TMEM179BQ7Z7N9 219 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 SUSD6Q92537 303 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 PPP1R16AQ96I34 528 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 IL17FQ96PD4 163 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 DPP7Q9UHL4 492 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 VPS4AQ9UN37 437 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 ASF1AQ9Y294 204 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 B3GNT3Q9Y2A9 372 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 TSC22D4Q9Y3Q8 395 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 CHD9Q3L8U1 2897 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 H0YAE9 185 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 YY2O15391 372 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 CNOT3O75175 753 aaKnown RBP13.17□□□□□ -0.3
SRSF1-205ENST00000582730 PRSS23O95084 383 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 CPNE6O95741 557 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 IL7RP16871 459 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 ZNF8P17098 575 aaPredicted RBP13.17□□□□□ -0.3
SRSF1-205ENST00000582730 GZMMP51124 257 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 WNT3P56703 355 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 GPM6BQ13491 265 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 CCNYL2Q5T2Q4 361 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 BTLAQ7Z6A9 289 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 GALNT5Q7Z7M9 940 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 NPAS3Q8IXF0 933 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 ETFBKMTQ8IXQ9 262 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 C8orf59Q8N0T1 100 aaPredicted RBP13.17□□□□□ -0.3
SRSF1-205ENST00000582730 ZCCHC7Q8N3Z6 543 aaKnown RBP13.17□□□□□ -0.3
SRSF1-205ENST00000582730 CXorf40AQ8TE69 158 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 OR51B5Q9H339 312 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 GIN1Q9NXP7 522 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 BAG5Q9UL15 447 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 SLC27A6Q9Y2P4 619 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 TCF20Q9UGU0 1960 aaKnown RBP13.17□□□□□ -0.3
SRSF1-205ENST00000582730 GABRR3A8MPY1 467 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 CCNDBP1O95273 360 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 TRPC1P48995 793 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 MTAPQ13126 283 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 BCL2A1Q16548 175 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 IER5LQ5T953 404 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 VTCN1Q7Z7D3 282 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 FGF13Q92913 245 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 TPD52L3Q96J77 140 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 CNDP2Q96KP4 475 aaKnown RBP13.17□□□□□ -0.3
SRSF1-205ENST00000582730 CSF3RQ99062 836 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 RBM4BQ9BQ04 359 aaKnown RBP13.17□□□□□ -0.3
SRSF1-205ENST00000582730 RBM4Q9BWF3 364 aaKnown RBP13.17□□□□□ -0.3
SRSF1-205ENST00000582730 TPT1P8Q9HAU6 139 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 EXD2Q9NVH0 621 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 ATAD3AQ9NVI7 634 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 FAM120CQ9NX05 1096 aaKnown RBP13.17□□□□□ -0.3
SRSF1-205ENST00000582730 DAPK2Q9UIK4 370 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 PSME2Q9UL46 239 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 SAMD4AQ9UPU9 718 aaKnown RBP13.17□□□□□ -0.3
SRSF1-205ENST00000582730 ORC6Q9Y5N6 252 aa13.17□□□□□ -0.3
SRSF1-205ENST00000582730 CFAP20Q9Y6A4 193 aaKnown RBP13.17□□□□□ -0.3
SRSF1-205ENST00000582730 H0Y858 1186 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 SCAMP2O15127 329 aaKnown RBP13.16□□□□□ -0.3
SRSF1-205ENST00000582730 HPCAL1P37235 193 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 PIGAP37287 484 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 DCTP40126 519 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 KCNAB2Q13303 367 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 FAM109BQ6ICB4 259 aaPredicted RBP13.16□□□□□ -0.3
SRSF1-205ENST00000582730 SLCO4C1Q6ZQN7 724 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 RASGRP3Q8IV61 690 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 SCAIQ8N9R8 606 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 VPS37AQ8NEZ2 397 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 OR4K1Q8NGD4 311 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 HCAR2Q8TDS4 363 aa13.16□□□□□ -0.3
SRSF1-205ENST00000582730 OSBPL10Q9BXB5 764 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms