RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 GSNP06396 782 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 FAM58BPP0C7Q3 252 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 PTX3P26022 381 aaPredicted RBP21.77■■□□□ 1.08
CCDC47-204ENST00000582252 CLCNKAP51800 687 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 ERICH5Q6P6B1 374 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 TMIGD1Q6UXZ0 262 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 CHST15Q7LFX5 561 aaPredicted RBP21.77■■□□□ 1.08
CCDC47-204ENST00000582252 SPRED1Q7Z699 444 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 SERPINA11Q86U17 422 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 PHACTR4Q8IZ21 702 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 ZNF687Q8N1G0 1237 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 ASB12Q8WXK4 309 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 KLK6Q92876 244 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 SH3KBP1Q96B97 665 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 AIF1LQ9BQI0 150 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 RAB11FIP5Q9BXF6 653 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 AHSPQ9NZD4 102 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 PLAGL1Q9UM63 463 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 KRBA1A5PL33 1030 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 FAM149AA5PLN7 773 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 SOCS2O14508 198 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 IL1RNP18510 177 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 CDKN2CP42773 168 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 WNT3P56703 355 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 TXNL4AP83876 142 aaKnown RBP21.77■■□□□ 1.08
CCDC47-204ENST00000582252 HKDC1Q2TB90 917 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 ADNP2Q6IQ32 1131 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 CBR4Q8N4T8 237 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 MYCBPQ99417 103 aaPredicted RBP21.77■■□□□ 1.08
CCDC47-204ENST00000582252 NELL2Q99435 816 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 SPATA9Q9BWV2 254 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 MAGIXQ9H6Y5 334 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 LTB4R2Q9NPC1 389 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 TM7SF3Q9NS93 570 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 SLC6A13Q9NSD5 602 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 SLC17A4Q9Y2C5 497 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 V9GYQ6 96 aa21.77■■□□□ 1.08
CCDC47-204ENST00000582252 TBC1D3DA0A087WVF3 549 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 TBC1D3IA0A087WXS9 549 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 TBC1D3EA0A087X179 549 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 TBC1D3KA0A087X1G2 549 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 TBC1D3FA6NER0 549 aaPredicted RBP21.76■■□□□ 1.07
CCDC47-204ENST00000582252 TBC1D3LB9A6J9 549 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 CLIC1O00299 241 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 CLOCKO15516 846 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 CREG1O75629 220 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 RASAL1O95294 804 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 TBC1D3HP0C7X1 549 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 ACP5P13686 325 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 GZMMP51124 257 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 CTBSQ01459 385 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 TBC1D3GQ6DHY5 549 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 TBC1D3CQ6IPX1 549 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 USP30Q70CQ3 517 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 COMMD6Q7Z4G1 85 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 TBC1D3Q8IZP1 549 aaPredicted RBP21.76■■□□□ 1.07
CCDC47-204ENST00000582252 METTL4Q8N3J2 472 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 COQ8BQ96D53 544 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 BHLHE41Q9C0J9 482 aaPredicted RBP21.76■■□□□ 1.07
CCDC47-204ENST00000582252 OSGEPL1Q9H4B0 414 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 LMAN1LQ9HAT1 526 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 OLAHQ9NV23 265 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 ATP6V1HQ9UI12 483 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 OAZ3Q9UMX2 235 aa21.76■■□□□ 1.07
CCDC47-204ENST00000582252 CHURC1-FNTBB4DL54 471 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 SCN2BO60939 215 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 SH3BGRLO75368 114 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 CPSF4O95639 269 aaKnown RBP21.75■■□□□ 1.07
CCDC47-204ENST00000582252 IGFALSP35858 605 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 UBXN2BQ14CS0 331 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 Q6ZS52 159 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 ZNF621Q6ZSS3 439 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 FAM129CQ86XR2 697 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 EPHX4Q8IUS5 362 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 CHERPQ8IWX8 916 aaKnown RBP21.75■■□□□ 1.07
CCDC47-204ENST00000582252 SIX5Q8N196 739 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 MIEF2Q96C03 454 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 SLC47A1Q96FL8 570 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 SIPA1Q96FS4 1042 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 AURKBQ96GD4 344 aaPredicted RBP21.75■■□□□ 1.07
CCDC47-204ENST00000582252 VPS50Q96JG6 964 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 C12orf66Q96MD2 445 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 FERD3LQ96RJ6 166 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 APOOQ9BUR5 198 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 FAM192AQ9GZU8 254 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 REEP4Q9H6H4 257 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 WASH6PQ9NQA3 447 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 TAC3Q9UHF0 121 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 DOCK9Q9BZ29 2069 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 ARHGAP10A1A4S6 786 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 ANKDD1BA6NHY2 528 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 KDM1AO60341 852 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 TGFB1P01137 390 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 LAMP1P11279 417 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 IDSP22304 550 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 CCR8P51685 355 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 TMEM92Q6UXU6 159 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 EID3Q8N140 333 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 FBXO30Q8TB52 745 aa21.75■■□□□ 1.07
CCDC47-204ENST00000582252 MTERF3Q96E29 417 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms