RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 PABPC1P11940 636 aaKnown RBP13.21□□□□□ -0.3
RNF43-205ENST00000581868 POU2F1P14859 743 aa13.21□□□□□ -0.3
RNF43-205ENST00000581868 GGT2P36268 569 aa13.21□□□□□ -0.3
RNF43-205ENST00000581868 CRISP3P54108 245 aa13.21□□□□□ -0.3
RNF43-205ENST00000581868 PPIGQ13427 754 aaKnown RBP eCLIP13.21□□□□□ -0.33e-7■□□□□ 11.2
RNF43-205ENST00000581868 NEK10Q6ZWH5 1172 aa13.21□□□□□ -0.3
RNF43-205ENST00000581868 GPR155Q7Z3F1 870 aa13.21□□□□□ -0.3
RNF43-205ENST00000581868 TSEN54Q7Z6J9 526 aaKnown RBP13.21□□□□□ -0.3
RNF43-205ENST00000581868 THOC6Q86W42 341 aaKnown RBP13.21□□□□□ -0.3
RNF43-205ENST00000581868 STX19Q8N4C7 294 aa13.21□□□□□ -0.3
RNF43-205ENST00000581868 DNAJC22Q8N4W6 341 aa13.21□□□□□ -0.3
RNF43-205ENST00000581868 ZNF675Q8TD23 568 aa13.21□□□□□ -0.3
RNF43-205ENST00000581868 GABARAPL3Q9BY60 117 aa13.21□□□□□ -0.3
RNF43-205ENST00000581868 MRPL9Q9BYD2 267 aaKnown RBP13.21□□□□□ -0.3
RNF43-205ENST00000581868 SUV39H2Q9H5I1 410 aa13.21□□□□□ -0.3
RNF43-205ENST00000581868 ZNF334Q9HCZ1 680 aaPredicted RBP13.21□□□□□ -0.3
RNF43-205ENST00000581868 LYVE1Q9Y5Y7 322 aa13.21□□□□□ -0.3
RNF43-205ENST00000581868 GNG14A0A1W2PPG7 69 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 CLCA1A8K7I4 914 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 GFYI3L273 518 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 SCAMP2O15127 329 aaKnown RBP13.2□□□□□ -0.3
RNF43-205ENST00000581868 CA12O43570 354 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 TLL1O43897 1013 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 PRMT3O60678 531 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 GCM2O75603 506 aaPredicted RBP13.2□□□□□ -0.3
RNF43-205ENST00000581868 SPNP16150 400 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 CDH12P55289 794 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 CSNK2BP67870 215 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 CSTF3Q12996 717 aaKnown RBP13.2□□□□□ -0.3
RNF43-205ENST00000581868 NAE1Q13564 534 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 TPRG1LQ5T0D9 272 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 USP43Q70EL4 1123 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 ZNF605Q86T29 641 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 BBS7Q8IWZ6 715 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 VPS37AQ8NEZ2 397 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 TET1Q8NFU7 2136 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 OR10G2Q8NGC3 310 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 FCGR1BQ92637 280 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 SCAMP4Q969E2 229 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 CHCHD6Q9BRQ6 235 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 ROGDIQ9GZN7 287 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 BRD9Q9H8M2 597 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 SGK2Q9HBY8 427 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 ABCB8Q9NUT2 735 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 NDUFAF4Q9P032 175 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 KLHL42Q9P2K6 505 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 SPASTQ9UBP0 616 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 CAB39Q9Y376 341 aaPredicted RBP13.2□□□□□ -0.3
RNF43-205ENST00000581868 BACE2Q9Y5Z0 518 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 TMEM229AB2RXF0 380 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 GFRA2O00451 464 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 DSCR3O14972 297 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 DNTTP04053 509 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 CDK1P06493 297 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 C1SP09871 688 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 MPC1LP0DKB6 136 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 SRCP12931 536 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 ALOX12P18054 663 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 CSNK1DP48730 415 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 HNRNPFP52597 415 aaKnown RBP13.2□□□□□ -0.3
RNF43-205ENST00000581868 SNRPD1P62314 119 aaKnown RBP13.2□□□□□ -0.3
RNF43-205ENST00000581868 CYP4F8P98187 520 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 SPIBQ01892 262 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 COX20Q5RI15 118 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 LIPJQ5W064 366 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 ZNF852Q6ZMS4 543 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 Q6ZNB5 142 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 AMER2Q8N7J2 671 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 KIAA1958Q8N8K9 716 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 OR4K1Q8NGD4 311 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 OR4A15Q8NGL6 344 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 WDR20Q8TBZ3 569 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 FCRL1Q96LA6 429 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 LYSMD1Q96S90 227 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 NIPSNAP1Q9BPW8 284 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 B4GALT6Q9UBX8 382 aa13.2□□□□□ -0.3
RNF43-205ENST00000581868 SCN8AQ9UQD0 1980 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.19□□□□□ -0.3
RNF43-205ENST00000581868 MGAT4DA6NG13 374 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 TMEM202A6NGA9 273 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 NPIPB8E9PQR5 432 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 SNPHO15079 494 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 ABLIM3O94929 683 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 GBAP04062 536 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 RPLP0P05388 317 aaKnown RBP13.19□□□□□ -0.3
RNF43-205ENST00000581868 CKMP06732 381 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 HLA-EP13747 358 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 ETFAP13804 333 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 UGT2B10P36537 528 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 PTPN5P54829 565 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 AP1S2P56377 157 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 TBCEQ15813 527 aaPredicted RBP13.19□□□□□ -0.3
RNF43-205ENST00000581868 CCSMST1Q4G0I0 132 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 SLC46A3Q7Z3Q1 461 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 HEATR4Q86WZ0 1026 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 NPAS3Q8IXF0 933 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 SCAIQ8N9R8 606 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 C11orf65Q8NCR3 313 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 AUTS2Q8WXX7 1259 aa13.19□□□□□ -0.3
RNF43-205ENST00000581868 TRMT2BQ96GJ1 504 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms