RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 TAGLN3Q9UI15 199 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 BTRCQ9Y297 605 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 PCDHGA8Q9Y5G5 932 aa12.95□□□□□ -0.34
CSNK1D-220ENST00000581737 IGHV5-51A0A0C4DH38 117 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 B4E171 279 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 PRICKLE3O43900 615 aaPredicted RBP12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 CHRNGP07510 517 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 HRH2P25021 359 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 EEF1DP29692 281 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 TSPAN7P41732 249 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 SEPHS1P49903 392 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 PKNOX1P55347 436 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 RAB15P59190 212 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 ACY1Q03154 408 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 SRSF1Q07955 248 aaKnown RBP eCLIP12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 VAC14Q08AM6 782 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 NAE1Q13564 534 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 FASTKQ14296 549 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 C3orf38Q5JPI3 329 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 BROXQ5VW32 411 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 SUSD1Q6UWL2 747 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 TRIM73Q86UV7 250 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 FAM129CQ86XR2 697 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 LSMEM2Q8N112 164 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 EXD3Q8N9H8 876 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 C19orf47Q8N9M1 422 aaKnown RBP12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 OR2L3Q8NG85 312 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 OR2A1Q8NGT9 310 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 OR56A3Q8NH54 315 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 FLVCR1-AS1Q8TAF5 88 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 TCTN2Q96GX1 697 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 PRR11Q96HE9 360 aaPredicted RBP12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 TRAPPC9Q96Q05 1148 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 MIPEPQ99797 713 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 SGPP1Q9BX95 441 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 NMUR2Q9GZQ4 415 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 CHRNA10Q9GZZ6 450 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 GSTO2Q9H4Y5 243 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 ZNF395Q9H8N7 513 aaPredicted RBP12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 POLR1BQ9H9Y6 1135 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 FANCEQ9HB96 536 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 PDE7BQ9NP56 450 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 NDE1Q9NXR1 346 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 TAC3Q9UHF0 121 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 SATB2Q9UPW6 733 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 ANGPTL3Q9Y5C1 460 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 PIEZO2Q9H5I5 2752 aa12.94□□□□□ -0.34
CSNK1D-220ENST00000581737 UBR5O95071 2799 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 A0A1W2PPV9 198 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 SLC9B1P1A6NJY1 282 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 EFCAB7A8K855 629 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 EFSO43281 561 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 RPS17P08708 135 aaKnown RBP12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 ST6GAL1P15907 406 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 NCF2P19878 526 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 UCNP55089 124 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 ERVPABLB-1P60509 514 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 STX1BP61266 288 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 MXRA7P84157 204 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 PRDX1Q06830 199 aaKnown RBP12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 RBBP7Q16576 425 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 TMEM164Q5U3C3 297 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 CES4AQ5XG92 561 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 ICE2Q659A1 982 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 NXNQ6DKJ4 435 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 IGF2-ASQ6U949 168 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 LCTLQ6UWM7 567 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 C17orf64Q86WR6 236 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 LURAP1LQ8IV03 231 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 KLHDC8AQ8IYD2 350 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 LRRC56Q8IYG6 542 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 D2HGDHQ8N465 521 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 PPFIBP2Q8ND30 876 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 AGR3Q8TD06 166 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 ACTRT2Q8TDY3 377 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 ZUFSPQ96AP4 578 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 MCUR1Q96AQ8 359 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 RHBDF1Q96CC6 855 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 ACAT2Q9BWD1 397 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 ATG10Q9H0Y0 220 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 MMADHCQ9H3L0 296 aaPredicted RBP12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 MRPS30Q9NP92 439 aaKnown RBP12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 SIDT1Q9NXL6 827 aaKnown RBP12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 PISDQ9UG56 409 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 TRAF6Q9Y4K3 522 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 KLK4Q9Y5K2 254 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 HEATR5BQ9P2D3 2071 aa12.93□□□□□ -0.34
CSNK1D-220ENST00000581737 NCF1BA6NI72 391 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 NCF1CA8MVU1 366 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 AZIN1O14977 448 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 GYG2O15488 501 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 KATNA1O75449 491 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 OTCP00480 354 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 FGF4P08620 206 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 MSL3P1P0C860 447 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 NCF1P14598 390 aaPredicted RBP12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 PVRP15151 417 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 NQO1P15559 274 aaKnown RBP12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 MAGP20916 626 aa12.92□□□□□ -0.34
CSNK1D-220ENST00000581737 PSMB5P28074 263 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms